miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 93.7 bits (47), Expect = 3e-20
Identities = 77/87 (88%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcactaaagtagtaatctaaatgct 75
||||||||||||||| ||||| || |||||||||||||| ||||||| ||||||| |||
Sbjct: 9 tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68
Query: 76 cttatattagtttaaggagggagtact 102
|||||||| |||| ||||||||||||
Sbjct: 69 cttatatttctttacggagggagtact 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcacta 56
||||||||| ||||| |||||||| | |||||||||||||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcacta 53
>54756_tmo-miR1120:pmrd
Length = 85
Score = 91.7 bits (46), Expect = 1e-19
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataagtgtgtttagatcactaaagtagtaatctaaatgctctt 78
|||||||||||||||||||||| ||||||||||||||||||| ||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 79 atattagtttaaggagggagta 100
||||||||||| |||||||||
Sbjct: 64 atattagtttacagagggagta 85
Score = 67.9 bits (34), Expect = 2e-12
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcactaaagtagtaatctaaatgct 75
||||||||||||||||||||||||| |||||||||||| |||| ||||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 76 cttatattagttta 89
||||||||||||||
Sbjct: 25 cttatattagttta 12
>54761_tur-miR1120:pmrd
Length = 84
Score = 75.8 bits (38), Expect = 6e-15
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 19 tccctctgtaaactaatataagtgtgtttagatcactaaagtagtaatctaaatgctctt 78
|||||||||||||||||||||| ||||||||||||| ||||| ||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaa-gtagtgatctaaaaggtctt 62
Query: 79 atattagtttaaggagggagta 100
||||||||||| |||||||||
Sbjct: 63 atattagtttacagagggagta 84
Score = 60.0 bits (30), Expect = 4e-10
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcactaaagtagtaatctaaatgct 75
||||||||||||||||||||||||| ||||||||||| | |||| ||||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcact-acttagtgatctaaaaggt 26
Query: 76 cttatattagttta 89
||||||||||||||
Sbjct: 25 cttatattagttta 12
>54753_tae-miR2033b:pmrd
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcacta 56
|||||| |||||||| |||||||| |||||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcacta 32
>48304_ave-miR1120:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 72/88 (81%), Gaps = 6/88 (6%)
Strand = Plus / Minus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcactaaagtagtaatctaaatgct 75
||||||||||||||| |||||||| | |||||||||| |||| ||||||| |||
Sbjct: 82 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 29
Query: 76 cttatattagtttaaggagggagtactt 103
|||||||| |||| ||||||||||||
Sbjct: 28 cttatatttctttacagagggagtactt 1
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 16 tactccctctgtaaactaatataagtgtgtttagatcacta 56
||||||||||||||| |||||||| | |||||||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcacta 44
