miRNEST 2.0, an integrative microRNA resource :: BLAST
>54756_tmo-miR1120:pmrd
Length = 85
Score = 107 bits (54), Expect = 2e-24
Identities = 75/82 (91%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||||| | ||||||||||||||||||| |||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 86 cttatattagtttacggaggga 107
||||||||||||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4
Score = 83.8 bits (42), Expect = 3e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctctt 88
||||||||||||||||||||||| | |||||||||||| |||| |||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 89 atattagtttacggagggagta 110
|||||||||||| |||||||||
Sbjct: 64 atattagtttacagagggagta 85
>54761_tur-miR1120:pmrd
Length = 84
Score = 91.7 bits (46), Expect = 1e-19
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
|||||||||||||||||||||||||| | ||||||||||||| ||||| |||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaaggt 26
Query: 86 cttatattagtttacggaggga 107
||||||||||||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4
Score = 75.8 bits (38), Expect = 7e-15
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 29 tccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgctctt 88
||||||||||||||||||||||| | |||||||||||| |||| |||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcacta-agtagtgatctaaaaggtctt 62
Query: 89 atattagtttacggagggagta 110
|||||||||||| |||||||||
Sbjct: 63 atattagtttacagagggagta 84
>54696_tae-miR1121:pmrd
Length = 98
Score = 79.8 bits (40), Expect = 5e-16
Identities = 76/88 (86%)
Strand = Plus / Minus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatg 83
||||||||||| ||||| ||||||||||||||||||||||||||| ||| ||||||
Sbjct: 95 agtactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaaca 36
Query: 84 ctcttatattagtttacggagggagtac 111
|||| ||||| ||||| ||||||||||
Sbjct: 35 ctctaatatttctttacagagggagtac 8
Score = 69.9 bits (35), Expect = 5e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 25 gtactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgc 84
|||||||||||||||| ||||| |||| |||||||||||| |||| |||||| ||
Sbjct: 8 gtactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgc 67
Query: 85 tcttatattagtttacggagggagtac 111
||||||||| ||||||||||||||||
Sbjct: 68 tcttatatttctttacggagggagtac 94
>48304_ave-miR1120:pmrd
Length = 85
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 24 agtactccctctgtaaactaatataagagcgtttagatcacta 66
||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 agtactccctctgtaaagaaatataagagcgtttagatcacta 44
Score = 61.9 bits (31), Expect = 1e-10
Identities = 72/86 (83%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcactactttagtattctaaatgct 85
||||||||||||||| ||||||||||||||||||||| |||| |||||| |||
Sbjct: 82 tactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgct 29
Query: 86 cttatattagtttacggagggagtac 111
|||||||| ||||| ||||||||||
Sbjct: 28 cttatatttctttacagagggagtac 3
>54753_tae-miR2033b:pmrd
Length = 72
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 26 tactccctctgtaaactaatataagagcgtttagatcacta 66
|||||| |||||||| |||||||||| |||||||||||||
Sbjct: 72 tactccttctgtaaagaaatataagagtgtttagatcacta 32
