miRNEST 2.0, an integrative microRNA resource :: BLAST
>54756_tmo-miR1120:pmrd
Length = 85
Score = 91.7 bits (46), Expect = 8e-20
Identities = 73/82 (89%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctt 68
|||||| |||||||||||||||| | |||||| |||||| ||| |||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 69 atattagtttacagagggagta 90
||||||||||||||||||||||
Sbjct: 64 atattagtttacagagggagta 85
Score = 75.8 bits (38), Expect = 5e-15
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||| | |||||| |||| ||| |||||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 66 cttatattagtttacagaggga 87
||||||||||||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4
>54761_tur-miR1120:pmrd
Length = 84
Score = 75.8 bits (38), Expect = 5e-15
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgctctt 68
|||||| |||||||||||||||| | |||||| ||||| ||| |||||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaag-tagtgatctaaaaggtctt 62
Query: 69 atattagtttacagagggagta 90
||||||||||||||||||||||
Sbjct: 63 atattagtttacagagggagta 84
Score = 67.9 bits (34), Expect = 1e-12
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| |||||||||||||||| | |||||| |||| ||| |||||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcactact-tagtgatctaaaaggt 26
Query: 66 cttatattagtttacagaggga 87
||||||||||||||||||||||
Sbjct: 25 cttatattagtttacagaggga 4
>54696_tae-miR1121:pmrd
Length = 98
Score = 69.9 bits (35), Expect = 3e-13
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||| ||||| |||| ||||||| ||| || ||| ||||||||||||
Sbjct: 9 tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68
Query: 66 cttatattagtttacagagggagtact 92
|||||||| ||||| |||||||||||
Sbjct: 69 cttatatttctttacggagggagtact 95
Score = 67.9 bits (34), Expect = 1e-12
Identities = 73/86 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||||||||| |||||||||||||||||| |||| || ||||||||| ||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34
Query: 66 cttatattagtttacagagggagtac 91
|| ||||| ||||||||||||||||
Sbjct: 33 ctaatatttctttacagagggagtac 8
>48304_ave-miR1120:pmrd
Length = 85
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 49 atagagatctaaacgctcttatattagtttacagagggagtactt 93
|||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 45 atagtgatctaaacgctcttatatttctttacagagggagtactt 1
Score = 60.0 bits (30), Expect = 3e-10
Identities = 71/85 (83%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 6 tactccctccgtaaactaatataagagcgtttagaatactaaaatagagatctaaacgct 65
||||||||| ||||| |||||||||||||||||| |||| ||||||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcactat------gatctaaacgct 57
Query: 66 cttatattagtttacagagggagta 90
|||||||| |||||||||||||||
Sbjct: 58 cttatatttctttacagagggagta 82
