miRNEST 2.0, an integrative microRNA resource :: BLAST
>54756_tmo-miR1120:pmrd
Length = 85
Score = 101 bits (51), Expect = 9e-23
Identities = 74/82 (90%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||| | |||| |||||||||||||| |||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 66 cttatattagtttacggaggga 87
||||||||||||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4
Score = 77.8 bits (39), Expect = 1e-15
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctctt 68
||||||||||||||||||||||| | |||| ||||||| |||| |||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 69 atattagtttacggagggagta 90
|||||||||||| |||||||||
Sbjct: 64 atattagtttacagagggagta 85
>54761_tur-miR1120:pmrd
Length = 84
Score = 85.7 bits (43), Expect = 5e-18
Identities = 73/82 (89%), Gaps = 1/82 (1%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
|||||||||||||||||||||||||| | |||| |||||||| ||||| |||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcactac-ttagtgatctaaaaggt 26
Query: 66 cttatattagtttacggaggga 87
||||||||||||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4
Score = 69.9 bits (35), Expect = 3e-13
Identities = 71/82 (86%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 9 tccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgctctt 68
||||||||||||||||||||||| | |||| ||||||| |||| |||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcacta-agtagtgatctaaaaggtctt 62
Query: 69 atattagtttacggagggagta 90
|||||||||||| |||||||||
Sbjct: 63 atattagtttacagagggagta 84
>54696_tae-miR1121:pmrd
Length = 98
Score = 67.9 bits (34), Expect = 1e-12
Identities = 72/85 (84%)
Strand = Plus / Minus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||| ||||| ||||||||||| |||| |||||||||| ||| ||||||| ||
Sbjct: 93 tactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacact 34
Query: 66 cttatattagtttacggagggagta 90
|| ||||| ||||| |||||||||
Sbjct: 33 ctaatatttctttacagagggagta 9
Score = 60.0 bits (30), Expect = 3e-10
Identities = 71/85 (83%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||| ||||| |||| |||| |||||| |||| ||||||||||
Sbjct: 9 tactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgct 68
Query: 66 cttatattagtttacggagggagta 90
|||||||| |||||||||||||||
Sbjct: 69 cttatatttctttacggagggagta 93
>48304_ave-miR1120:pmrd
Length = 85
Score = 56.0 bits (28), Expect = 5e-09
Identities = 71/86 (82%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 5 atactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgc 64
|||||||||||||||| ||||||||||| |||| |||| |||| |||||||||
Sbjct: 83 atactccctctgtaaagaaatataagagcgtttagatca------tagtgatctaaacgc 30
Query: 65 tcttatattagtttacggagggagta 90
||||||||| ||||| |||||||||
Sbjct: 29 tcttatatttctttacagagggagta 4
Score = 54.0 bits (27), Expect = 2e-08
Identities = 70/85 (82%), Gaps = 6/85 (7%)
Strand = Plus / Plus
Query: 6 tactccctctgtaaactaatataagagcatttanatcactactttagtattctaaacgct 65
||||||||||||||| ||||||||||| |||| ||||||| | ||||||||||
Sbjct: 4 tactccctctgtaaagaaatataagagcgtttagatcacta------tgatctaaacgct 57
Query: 66 cttatattagtttacggagggagta 90
|||||||| ||||| |||||||||
Sbjct: 58 cttatatttctttacagagggagta 82
