miRNEST 2.0, an integrative microRNA resource :: BLAST
>54696_tae-miR1121:pmrd
Length = 98
Score = 85.7 bits (43), Expect = 5e-18
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 5 gtactccctccgtaaactaatataagagcgtttagattactattttagttatctagacac 64
|||||||||||||||| ||||||||||||||||||| |||| || ||| ||||| ||||
Sbjct: 94 gtactccctccgtaaagaaatataagagcgtttagatcactacttaagtgatctaaacac 35
Query: 65 tcttatattagtttacagaggaagtac 91
||| ||||| |||||||||| |||||
Sbjct: 34 tctaatatttctttacagagggagtac 8
Score = 44.1 bits (22), Expect = 2e-05
Identities = 73/90 (81%)
Strand = Plus / Plus
Query: 3 atgtactccctccgtaaactaatataagagcgtttagattactattttagttatctagac 62
|||||||||||| ||||| ||||| |||| |||||||| ||| |||| ||||| ||
Sbjct: 6 atgtactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaac 65
Query: 63 actcttatattagtttacagaggaagtact 92
|||||||||| ||||| |||| ||||||
Sbjct: 66 gctcttatatttctttacggagggagtact 95
>54756_tmo-miR1120:pmrd
Length = 85
Score = 79.8 bits (40), Expect = 3e-16
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagattactattttagttatctagacact 65
||||||||| |||||||||||||||| | ||||||| |||| |||||| ||||| | |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26
Query: 66 cttatattagtttacagagg 85
||||||||||||||||||||
Sbjct: 25 cttatattagtttacagagg 6
Score = 60.0 bits (30), Expect = 3e-10
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagattactattttagttatctagacactctt 68
|||||| |||||||||||||||| | ||||||| |||| |||| ||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63
Query: 69 atattagtttacagaggaagta 90
||||||||||||||||| ||||
Sbjct: 64 atattagtttacagagggagta 85
>54761_tur-miR1120:pmrd
Length = 84
Score = 63.9 bits (32), Expect = 2e-11
Identities = 69/80 (86%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagattactattttagttatctagacact 65
||||||||| |||||||||||||||| | ||||||| |||| ||||| ||||| | |
Sbjct: 84 tactccctctgtaaactaatataagaccttttagatcacta-cttagtgatctaaaaggt 26
Query: 66 cttatattagtttacagagg 85
||||||||||||||||||||
Sbjct: 25 cttatattagtttacagagg 6
Score = 52.0 bits (26), Expect = 7e-08
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 9 tccctccgtaaactaatataagagcgtttagattactattttagttatctagacactctt 68
|||||| |||||||||||||||| | ||||||| |||| |||| ||||| | ||||
Sbjct: 4 tccctctgtaaactaatataagaccttttagatcacta-agtagtgatctaaaaggtctt 62
Query: 69 atattagtttacagaggaagta 90
||||||||||||||||| ||||
Sbjct: 63 atattagtttacagagggagta 84
>48304_ave-miR1120:pmrd
Length = 85
Score = 54.0 bits (27), Expect = 2e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 5 gtactccctccgtaaactaatataagagcgtttagattactat 47
|||||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 3 gtactccctctgtaaagaaatataagagcgtttagatcactat 45
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 6 tactccctccgtaaactaatataagagcgtttagat 41
||||||||| ||||| |||||||||||||||||||
Sbjct: 82 tactccctctgtaaagaaatataagagcgtttagat 47
