miRNEST 2.0, an integrative microRNA resource :: BLAST
>54756_tmo-miR1120:pmrd
Length = 85
Score = 85.7 bits (43), Expect = 8e-18
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 26 tattccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtt 85
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Sbjct: 1 tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 60
Query: 86 tttatattactttacggagggagta 110
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Sbjct: 61 cttatattagtttacagagggagta 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 65/79 (82%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgttttt 88
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Sbjct: 82 tccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggtctt 23
Query: 89 atattactttacggaggga 107
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Sbjct: 22 atattagtttacagaggga 4
>54761_tur-miR1120:pmrd
Length = 84
Score = 69.9 bits (35), Expect = 5e-13
Identities = 73/85 (85%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 26 tattccctctgtaaactaatataaaagcatttnnatcattaaagtagtgatctaaacgtt 85
|||||||||||||||||||||||| | | ||| |||| | ||||||||||||||| | |
Sbjct: 1 tattccctctgtaaactaatataagaccttttagatcact-aagtagtgatctaaaaggt 59
Query: 86 tttatattactttacggagggagta 110
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Sbjct: 60 cttatattagtttacagagggagta 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 29 tccctctgtaaactaatataa 49
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Sbjct: 81 tccctctgtaaactaatataa 61
>54696_tae-miR1121:pmrd
Length = 98
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 67 aagtagtgatctaaacgtttttatattactttacggagggagta 110
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Sbjct: 50 aagtagtgatctaaacgctcttatatttctttacggagggagta 93
>48304_ave-miR1120:pmrd
Length = 85
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 70 tagtgatctaaacgtttttatattactttacggagggagta 110
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Sbjct: 44 tagtgatctaaacgctcttatatttctttacagagggagta 4
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 73 tgatctaaacgtttttatattactttacggagggagtat 111
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Sbjct: 45 tgatctaaacgctcttatatttctttacagagggagtat 83
