miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 83.8 bits (42), Expect = 2e-17
 Identities = 74/85 (87%)
 Strand = Plus / Plus

                                                                      
Query: 6  tattccctctgtaaactaatataaaagcatttaaatcattaaagtaatgatctaaacgtt 65
          |||||||||||||||||||||||| | | |||| |||| ||||||| ||||||||| | |
Sbjct: 1  tattccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggt 60

                                   
Query: 66 tttatattagtttacggngggagta 90
           |||||||||||||| | |||||||
Sbjct: 61 cttatattagtttacagagggagta 85



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                      
Query: 9  tccctctgtaaactaatataaaagcatttaaatcattaaagtaatgatctaaacgttttt 68
          ||||||||||||||||||||| | | |||| |||| ||   || ||||||||| | | ||
Sbjct: 82 tccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggtctt 23

                      
Query: 69 atattagtttac 80
          ||||||||||||
Sbjct: 22 atattagtttac 11




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 67.9 bits (34), Expect = 1e-12
 Identities = 73/85 (85%), Gaps = 1/85 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  tattccctctgtaaactaatataaaagcatttaaatcattaaagtaatgatctaaacgtt 65
          |||||||||||||||||||||||| | | |||| |||| | ||||| ||||||||| | |
Sbjct: 1  tattccctctgtaaactaatataagaccttttagatcact-aagtagtgatctaaaaggt 59

                                   
Query: 66 tttatattagtttacggngggagta 90
           |||||||||||||| | |||||||
Sbjct: 60 cttatattagtttacagagggagta 84



 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 9  tccctctgtaaactaatataa 29
          |||||||||||||||||||||
Sbjct: 81 tccctctgtaaactaatataa 61




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 67/82 (81%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaagcatttaaatcattaaagtaatgatctaaacgttttt 68
          ||||||||||||  ||||| | ||  |||| |||| | ||||| ||||||||||| | ||
Sbjct: 12 tccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgctctt 71

                                
Query: 69 atattagtttacggngggagta 90
          |||||  ||||||| |||||||
Sbjct: 72 atatttctttacggagggagta 93