miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 65.9 bits (33), Expect = 5e-12
 Identities = 67/77 (87%), Gaps = 1/77 (1%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaagcatt-agatcattaaagtactgatctaaacactctt 67
          ||||||||||||||||||||| | | || |||||| ||||||| |||||||||   ||||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63

                           
Query: 68 atattagtttacggagg 84
          |||||||||||| ||||
Sbjct: 64 atattagtttacagagg 80



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  tactccctctgtaaactaatataa 29
          ||||||||||||||||||||||||
Sbjct: 85 tactccctctgtaaactaatataa 62




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 66/77 (85%), Gaps = 2/77 (2%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaagc-attagatcattaaagtactgatctaaacactctt 67
          ||||||||||||||||||||| | |  |||||||| | ||||| |||||||||   ||||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcact-aagtagtgatctaaaaggtctt 62

                           
Query: 68 atattagtttacggagg 84
          |||||||||||| ||||
Sbjct: 63 atattagtttacagagg 79



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  tactccctctgtaaactaatataa 29
          ||||||||||||||||||||||||
Sbjct: 84 tactccctctgtaaactaatataa 61




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 68/81 (83%), Gaps = 1/81 (1%)
 Strand = Plus / Plus

                                                                      
Query: 5  gtactccctctgtaaactaatataaaag-cattagatcattaaagtactgatctaaacac 63
          ||||||||||||||||  ||||| | ||   |||||||| | ||||| |||||||||| |
Sbjct: 8  gtactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgc 67

                               
Query: 64 tcttatattagtttacggagg 84
          |||||||||  ||||||||||
Sbjct: 68 tcttatatttctttacggagg 88




>54753_tae-miR2033b:pmrd
          Length = 72

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 52 tgatctaaacactcttatatt 72
          |||||||||||||||||||||
Sbjct: 35 tgatctaaacactcttatatt 55