miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54756_tmo-miR1120:pmrd
          Length = 85

 Score = 75.8 bits (38), Expect = 5e-15
 Identities = 71/82 (86%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaaacgtttaaatcattaaagtaatgatctaaatattttt 68
          ||||||||||||||||||||| | | |||| |||| ||||||| |||||||||   | ||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcactaaagtagtgatctaaaaggtctt 63

                                
Query: 69 atattagtttacggagggagta 90
          |||||||||||| |||||||||
Sbjct: 64 atattagtttacagagggagta 85



 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 68/82 (82%)
 Strand = Plus / Minus

                                                                      
Query: 6  tactccctctgtaaactaatataaaaacgtttaaatcattaaagtaatgatctaaatatt 65
          |||||||||||||||||||||||| | | |||| |||| ||   || |||||||||   |
Sbjct: 85 tactccctctgtaaactaatataagaccttttagatcactactttagtgatctaaaaggt 26

                                
Query: 66 tttatattagtttacggaggga 87
           |||||||||||||| ||||||
Sbjct: 25 cttatattagtttacagaggga 4




>54761_tur-miR1120:pmrd
          Length = 84

 Score = 60.0 bits (30), Expect = 3e-10
 Identities = 70/82 (85%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                      
Query: 9  tccctctgtaaactaatataaaaacgtttaaatcattaaagtaatgatctaaatattttt 68
          ||||||||||||||||||||| | | |||| |||| | ||||| |||||||||   | ||
Sbjct: 4  tccctctgtaaactaatataagaccttttagatcact-aagtagtgatctaaaaggtctt 62

                                
Query: 69 atattagtttacggagggagta 90
          |||||||||||| |||||||||
Sbjct: 63 atattagtttacagagggagta 84



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 6  tactccctctgtaaactaatataa 29
          ||||||||||||||||||||||||
Sbjct: 84 tactccctctgtaaactaatataa 61




>54696_tae-miR1121:pmrd
          Length = 98

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                      
Query: 5  gtactccctctgtaaactaatataaaaacgtttaaatcattaaagtaatgatctaaatat 64
          ||||||||||||||||  ||||| | |  ||||| |||| | ||||| |||||||||   
Sbjct: 8  gtactccctctgtaaagaaatattagagtgtttagatcacttaagtagtgatctaaacgc 67

                                    
Query: 65 ttttatattagtttacggagggagta 90
          | |||||||  |||||||||||||||
Sbjct: 68 tcttatatttctttacggagggagta 93