miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          |||||||||||||||||||||||||
Sbjct: 17 gtactccctccgtcccataatataa 41



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                             
Query: 63 aaaaacgttcttatattatgggacagaggaagtac 97
          ||||| |||||||||||||||||| |||| |||||
Sbjct: 51 aaaaatgttcttatattatgggacggagggagtac 17



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                       
Query: 52 agtgtagtgctaaaaacgttcttatattatgggacagaggaagta 96
          |||||||||  |||||| ||||||||||||| ||| |||| ||||
Sbjct: 55 agtgtagtgtcaaaaacattcttatattatgagacggagggagta 99



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccataatataa 34
          ||||||||||||| ||||||||||
Sbjct: 99 tactccctccgtctcataatataa 76




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          |||||||||||||||||||||||||
Sbjct: 8  gtactccctccgtcccataatataa 32




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          |||||||||||||||||||||||||
Sbjct: 8  gtactccctccgtcccataatataa 32




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 10  gtactccctccgtcccataatataa 34
           |||||||||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataatataa 104



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 72  cttatattatgggacagaggaagtacta 99
           ||||||||||||||| |||| |||||||
Sbjct: 103 cttatattatgggacggagggagtacta 130




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccgtcccataatataa 34
          ||||||||||||||||||||||||
Sbjct: 10 tactccctccgtcccataatataa 33



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 11  tactccctccgtcccataatataa 34
           ||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataa 90




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 11 tactccctccgtcccataatataa 34
          ||||||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataatataa 74




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 11 tactccctccgtcccataatataa 34
          ||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccataatataa 30



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 11  tactccctccgtcccataatataa 34
           ||||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataatataa 98




>49621_osa-miRf10406-akr:pmrd
          Length = 115

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 8   ttgtactccctccgtcccataat 30
           |||||||||||||||||||||||
Sbjct: 109 ttgtactccctccgtcccataat 87




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 11 tactccctccgtcccataatataaaaa 37
          |||||||||||||||||||||| ||||
Sbjct: 12 tactccctccgtcccataatattaaaa 38



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tactccctccgtcccataat 30
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123




>50431_osa-miRf11216-akr:pmrd
          Length = 93

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 6  tattgtactccctccgtcccat 27
          ||||||||||||||||||||||
Sbjct: 58 tattgtactccctccgtcccat 79




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          |||||||||||||||||| ||||||
Sbjct: 32 gtactccctccgtcccatgatataa 8




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          |||||||||||||||||| ||||||
Sbjct: 35 gtactccctccgtcccatgatataa 11




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 10 gtactccctccgtcccataatataa 34
          ||||||||||||||||| |||||||
Sbjct: 93 gtactccctccgtcccaaaatataa 69




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 tactccctccgtcccataatataaa 35
          |||||||||||||||| ||||||||
Sbjct: 10 tactccctccgtcccaaaatataaa 34




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 tactccctccgtcccataatataaa 35
          |||||||||||||||| ||||||||
Sbjct: 10 tactccctccgtcccaaaatataaa 34




>51023_osa-miRf11808-akr:pmrd
          Length = 117

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 9  tgtactccctccgtcccataatataaaa 36
          |||||||||||||||||  |||||||||
Sbjct: 3  tgtactccctccgtccctaaatataaaa 30




>50920_osa-miRf11705-akr:pmrd
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 11  tactccctccgtcccataatataa 34
           |||||||||||||||| |||||||
Sbjct: 122 tactccctccgtcccaaaatataa 99




>50397_osa-miRf11182-akr:pmrd
          Length = 80

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 11 tactccctccgtcccataat 30
          ||||||||||||||||||||
Sbjct: 68 tactccctccgtcccataat 49




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 10 gtactccctccgtcccataatataaaaa 37
          ||||||||||||||||  ||||||||||
Sbjct: 6  gtactccctccgtccctaaatataaaaa 33




>49925_osa-miRf10710-akr:pmrd
          Length = 116

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  gtactccctccgtcccataatata 33
           ||||||||||||||||| ||||||
Sbjct: 109 gtactccctccgtcccagaatata 86




>49787_osa-miRf10572-akr:pmrd
          Length = 109

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tactccctccgtcccataat 30
          ||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataat 28



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tactccctccgtcccataat 30
           ||||||||||||||||||||
Sbjct: 101 tactccctccgtcccataat 82




>49786_osa-miRf10571-akr:pmrd
          Length = 109

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 11 tactccctccgtcccataat 30
          ||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataat 28



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  tactccctccgtcccataat 30
           ||||||||||||||||||||
Sbjct: 101 tactccctccgtcccataat 82




>49314_osa-miRf10099-akr:pmrd
          Length = 144

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 10 gtactccctccgtcccataatata 33
          ||||||||||||||||| ||||||
Sbjct: 13 gtactccctccgtcccaaaatata 36