miRNEST 2.0, an integrative microRNA resource :: BLAST
>54697_tae-miR1122:pmrd
Length = 295
Score = 63.9 bits (32), Expect = 3e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 77 tagatacatccgtatctagacaaatcaaagacaagtaattcggaacggagggagta 132
||||||||||||||||||||| |||| |||||||| | || || ||||||||||||
Sbjct: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 27 cttgtcttggatttgtctatatacggatgtatctagcactataatgagtctagatacatc 86
|||||||| |||| ||||| ||||||||||||||| |||| || | || |||||||
Sbjct: 130 cttgtcttagattagtctagatacggatgtatctaatactaaaacatgacttgatacata 71
Query: 87 cgtatctagacaaatc 102
||||| ||||||||||
Sbjct: 70 cgtatttagacaaatc 55
>54757_tmo-miR1122:pmrd
Length = 180
Score = 60.0 bits (30), Expect = 4e-10
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 27 cttgtcttggatttgtctatatacggatgtatctagcactataatgagtctagatacatc 86
|||||||| |||||| || ||||||||||||||| ||||| |||| ||| |||||||
Sbjct: 131 cttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaactacatacatc 72
Query: 87 cgtatctagacaaatcaaagacaagtaattcggaacggagggagta 132
| ||| ||||||||| ||||||| | || || ||||||||||||
Sbjct: 71 catatttagacaaatttaagacaacaattttgggacggagggagta 26
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 77 tagatacatccgtatctagacaaatcaaagacaag 111
|||||||||||||||||| |||||| ||||||||
Sbjct: 97 tagatacatccgtatctaaacaaatgtaagacaag 131
>48647_hpi-miR1122:pmrd
Length = 180
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 76 ctagatacatccgtatctagacaaatcaaagacaagtaattcggaacggagggagta 132
|||||||||||||||| |||||||||| | |||||| | || || ||||||||||||
Sbjct: 84 ctagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagta 28
Score = 54.0 bits (27), Expect = 3e-08
Identities = 55/63 (87%), Gaps = 1/63 (1%)
Strand = Plus / Plus
Query: 1 gacaaatacttcctccgttccaat-tacttgtcttggatttgtctatatacggatgtatc 59
|||||||||| ||||||| |||| | |||||| | |||||||||| |||||||||||||
Sbjct: 22 gacaaatactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatc 81
Query: 60 tag 62
|||
Sbjct: 82 tag 84
>54711_tae-miR1136:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 106 gacaagtaattcggaacggagggagta 132
|||||||||||||||||||||||||||
Sbjct: 27 gacaagtaattcggaacggagggagta 1
>54710_tae-miR1135:pmrd
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 106 gacaagtaattcggaacggagggagtag 133
|||||||||||| |||||||||||||||
Sbjct: 82 gacaagtaattccgaacggagggagtag 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 105 agacaagtaattcggaacggagggagtag 133
||||||||||||| ||| |||||||||||
Sbjct: 29 agacaagtaattccgaatggagggagtag 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 51 ggatgtatctagcactataatgagtctagatacatc 86
|||||||||||| |||| ||| |||||||||||||
Sbjct: 37 ggatgtatctagaactaaaatacgtctagatacatc 72
>54702_tae-miR1127:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 106 gacaagtaattcggaacggagggagta 132
|||||||||||| ||||||||||||||
Sbjct: 108 gacaagtaattccgaacggagggagta 134
>46909_ata-miR1122:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 51 ggatgtatctagcactataatgagtctagatacatcc 87
|||||||||||| |||| ||| ||||||||||||||
Sbjct: 97 ggatgtatctagaactaaaatacgtctagatacatcc 61
