miRNEST 2.0, an integrative microRNA resource :: BLAST
>54697_tae-miR1122:pmrd
Length = 295
Score = 81.8 bits (41), Expect = 1e-16
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 6 tactccctccgttccgaattacttgtcttagatttgtctagatacggatgtatctagcac 65
|||||||||||| || || | ||||||||||||| ||||||||||||||||||||| ||
Sbjct: 151 tactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatctaatac 92
Query: 66 taaaatgagtctagatacatccgtatctagacaaatc 102
||||| | || ||||||| ||||| ||||||||||
Sbjct: 91 taaaacatgacttgatacatacgtatttagacaaatc 55
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 77 tagatacatccgtatctagacaaatccaaga 107
||||||||||||||||||||| |||| ||||
Sbjct: 96 tagatacatccgtatctagactaatctaaga 126
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 32 cttagatttgtctagatacggatgtatc 59
|||||||||||||| ||||| |||||||
Sbjct: 51 cttagatttgtctaaatacgtatgtatc 78
>54757_tmo-miR1122:pmrd
Length = 180
Score = 77.8 bits (39), Expect = 2e-15
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 27 cttgtcttagatttgtctagatacggatgtatctagcactaaaatgagtctagatacatc 86
||||||||| |||||| |||||||||||||||||| |||||||||| ||| |||||||
Sbjct: 131 cttgtcttacatttgtttagatacggatgtatctaacactaaaatgtaactacatacatc 72
Query: 87 cgtatctagacaaat 101
| ||| |||||||||
Sbjct: 71 catatttagacaaat 57
Score = 44.1 bits (22), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 5 gtactccctccgttccgaattacttgtcttagatttgtctagatacggatgtat 58
||||||||||||| || || | |||||||| ||||||||| ||| ||||||||
Sbjct: 25 gtactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtat 78
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tagatacatccgtatctagacaaat 101
|||||||||||||||||| ||||||
Sbjct: 97 tagatacatccgtatctaaacaaat 121
>48647_hpi-miR1122:pmrd
Length = 180
Score = 75.8 bits (38), Expect = 7e-15
Identities = 82/97 (84%)
Strand = Plus / Minus
Query: 6 tactccctccgttccgaattacttgtcttagatttgtctagatacggatgtatctagcac 65
|||||||||||| || || | || ||||||||||||| |||||| | |||| |||| |||
Sbjct: 154 tactccctccgtcccaaaattctngtcttagatttgtttagatatgaatgtgtctaacac 95
Query: 66 taaaatgagtctagatacatccgtatctagacaaatc 102
||||| | |||||||||||||||| ||||||||||
Sbjct: 94 taaaacatgactagatacatccgtatttagacaaatc 58
Score = 65.9 bits (33), Expect = 7e-12
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 6 tactccctccgttccgaattacttgtcttagatttgtctagatacggatgtatctag 62
|||||||||||| || || | |||||| |||||||||||| ||||||||||||||||
Sbjct: 28 tactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctag 84
>54711_tae-miR1136:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 6 tactccctccgttccgaattacttgtc 32
|||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttccgaattacttgtc 27
>54710_tae-miR1135:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 46 gatacggatgtatctagcactaaaatgagtctagatacatc 86
|||| |||||||||||| |||||||| |||||||||||||
Sbjct: 32 gatatggatgtatctagaactaaaatacgtctagatacatc 72
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttccgaattacttgtc 32
|||||||||||||| ||||||||||||
Sbjct: 108 tactccctccgttcggaattacttgtc 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 100 atccaagaaaagtaattcagaatggagggagtag 133
|||| ||| ||||||||| |||||||||||||||
Sbjct: 34 atccgagacaagtaattccgaatggagggagtag 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 tactccctccgttccgaattacttgtct 33
|||||||||| ||| |||||||||||||
Sbjct: 2 tactccctccattcggaattacttgtct 29
>46909_ata-miR1122:pmrd
Length = 170
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 51 ggatgtatctagcactaaaatgagtctagatacatcc 87
|||||||||||| |||||||| ||||||||||||||
Sbjct: 97 ggatgtatctagaactaaaatacgtctagatacatcc 61
>54702_tae-miR1127:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 6 tactccctccgttccgaattacttgtc 32
|||||||||||||| ||||||||||||
Sbjct: 134 tactccctccgttcggaattacttgtc 108
>54762_tur-miR1122:pmrd
Length = 180
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 29 tgtcttagatttgtctagatacggatgtat 58
||||||||||||||||| ||||| ||||||
Sbjct: 49 tgtcttagatttgtctacatacgaatgtat 78
>54703_tae-miR1128:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 51 ggatgtatctagcactaaaatgagtctagatacatcc 87
|||||||||||| |||||||| |||||||||||||
Sbjct: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
