miRNEST 2.0, an integrative microRNA resource :: BLAST
>54757_tmo-miR1122:pmrd
Length = 180
Score = 69.9 bits (35), Expect = 7e-13
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 85 tagatacggatgtatctagcactaaaatgagtctagatacatccgtatctagacaaatct 144
|||||||||||||||||| |||||||||| ||| |||||||| ||| ||||||||| |
Sbjct: 114 tagatacggatgtatctaacactaaaatgtaactacatacatccatatttagacaaattt 55
Query: 145 aagacaa 151
|||||||
Sbjct: 54 aagacaa 48
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 118 tagatacatccgtatctagacaaatctaagacaag 152
|||||||||||||||||| |||||| |||||||||
Sbjct: 97 tagatacatccgtatctaaacaaatgtaagacaag 131
Score = 52.0 bits (26), Expect = 2e-07
Identities = 41/46 (89%)
Strand = Plus / Minus
Query: 37 cttgtcttggatttgtctagatacggatgtatctcgcactaaaatg 82
|||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct: 131 cttgtcttacatttgtttagatacggatgtatctaacactaaaatg 86
>54697_tae-miR1122:pmrd
Length = 295
Score = 63.9 bits (32), Expect = 4e-11
Identities = 50/56 (89%)
Strand = Plus / Plus
Query: 118 tagatacatccgtatctagacaaatctaagacaagtaattcggaagggagggagta 173
||||||||||||||||||||| ||||||||||||| | || || | ||||||||||
Sbjct: 96 tagatacatccgtatctagactaatctaagacaagaattttgggacggagggagta 151
Score = 61.9 bits (31), Expect = 2e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 16 tactccctccgttccgaattacttgtcttggatttgtctagatacggatgtatct 70
|||||||||||| || || | |||||||| |||| ||||||||||||||||||||
Sbjct: 151 tactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatct 97
Score = 54.0 bits (27), Expect = 4e-08
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 85 tagatacggatgtatctagcactaaaatgagtctagatacatccgtatctagacaaatct 144
|||||||||||||||||| ||||||| | || ||||||| ||||| |||||||||||
Sbjct: 113 tagatacggatgtatctaatactaaaacatgacttgatacatacgtatttagacaaatct 54
Query: 145 aag 147
|||
Sbjct: 53 aag 51
>54762_tur-miR1122:pmrd
Length = 180
Score = 61.9 bits (31), Expect = 2e-10
Identities = 55/63 (87%)
Strand = Plus / Minus
Query: 88 atacggatgtatctagcactaaaatgagtctagatacatccgtatctagacaaatctaag 147
||||| ||||||||| |||||||||| | || |||||| ||||| ||||||||||||||
Sbjct: 111 atacgaatgtatctaacactaaaatgtgaataaatacattcgtatgtagacaaatctaag 52
Query: 148 aca 150
|||
Sbjct: 51 aca 49
>48647_hpi-miR1122:pmrd
Length = 180
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 117 ctagatacatccgtatctagacaaatctaagacaagtaattcggaagggagggagta 173
|||||||||||||||| |||||||||||| |||||| | || || | ||||||||||
Sbjct: 84 ctagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagta 28
Score = 54.0 bits (27), Expect = 4e-08
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 16 tactccctccgttccgaattacttgtcttggatttgtctagatacggatgtatct 70
|||||||||||| || || | |||||| | |||||||||| ||||||||||||||
Sbjct: 28 tactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatct 82
>54711_tae-miR1136:pmrd
Length = 107
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 tactccctccgttccgaattacttgtc 42
|||||||||||||||||||||||||||
Sbjct: 1 tactccctccgttccgaattacttgtc 27
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 147 gacaagtaattcggaagggagggagta 173
|||||||||||||||| ||||||||||
Sbjct: 27 gacaagtaattcggaacggagggagta 1
>54710_tae-miR1135:pmrd
Length = 109
Score = 50.1 bits (25), Expect = 6e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 87 gatacggatgtatctagcactaaaatgagtctagatacatc 127
|||| |||||||||||| |||||||| |||||||||||||
Sbjct: 32 gatatggatgtatctagaactaaaatacgtctagatacatc 72
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 15 ctactccctccgttccgaattacttgtc 42
||||||||||||||| ||||||||||||
Sbjct: 109 ctactccctccgttcggaattacttgtc 82
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 15 ctactccctccgttccgaattacttgtcttggat 48
||||||||||| ||| ||||||||||||| ||||
Sbjct: 1 ctactccctccattcggaattacttgtctcggat 34
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 146 agacaagtaattcggaagggagggagta 173
||||||||||||| ||| ||||||||||
Sbjct: 29 agacaagtaattccgaatggagggagta 2
>46909_ata-miR1122:pmrd
Length = 170
Score = 50.1 bits (25), Expect = 6e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 92 ggatgtatctagcactaaaatgagtctagatacatcc 128
|||||||||||| |||||||| ||||||||||||||
Sbjct: 97 ggatgtatctagaactaaaatacgtctagatacatcc 61
>54702_tae-miR1127:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 16 tactccctccgttccgaattacttgtc 42
|||||||||||||| ||||||||||||
Sbjct: 134 tactccctccgttcggaattacttgtc 108
>54712_tae-miR1137:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 9 ttactactactccctccgttcc 30
||||||||||||||||||||||
Sbjct: 120 ttactactactccctccgttcc 99
>54703_tae-miR1128:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 92 ggatgtatctagcactaaaatgagtctagatacatcc 128
|||||||||||| |||||||| |||||||||||||
Sbjct: 79 ggatgtatctagaactaaaatacatctagatacatcc 115
