miRNEST 2.0, an integrative microRNA resource :: BLAST
>54710_tae-miR1135:pmrd
Length = 109
Score = 127 bits (64), Expect = 2e-30
Identities = 91/100 (91%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 101 tccgttcggaattacttgtcgcagaaatagatgtatctagacgtattttagttctagata 42
Query: 76 catccatttttgagacaagtaattccgaacggagggagta 115
||||||| | |||||||||||||||||| ||||||||||
Sbjct: 41 catccatatccgagacaagtaattccgaatggagggagta 2
Score = 79.8 bits (40), Expect = 4e-16
Identities = 82/96 (85%)
Strand = Plus / Plus
Query: 20 ttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagatacatc 79
|||||||||||||||| ||| ||| ||||||||||| || || ||||||||||||
Sbjct: 13 ttcggaattacttgtctcggatatggatgtatctagaactaaaatacgtctagatacatc 72
Query: 80 catttttgagacaagtaattccgaacggagggagta 115
|||| || |||||||||||||||||||||||||||
Sbjct: 73 tatttctgcgacaagtaattccgaacggagggagta 108
>54711_tae-miR1136:pmrd
Length = 107
Score = 95.6 bits (48), Expect = 7e-21
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
||||||| ||||||||||||| | ||| |||||||||||||||||||||||||| |||
Sbjct: 8 tccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagttctaaata 67
Query: 76 catccatttttgagacaagtaattccgaacggagggagta 115
||||||||| || ||| ||||||| |||||||||||||
Sbjct: 68 catccatttctgcgacgagtaatttgaaacggagggagta 107
Score = 56.0 bits (28), Expect = 6e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 68 tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
||||||||||||||| || |||||||||||| ||||||||||||||
Sbjct: 48 tctagatacatccatacctgcgacaagtaattcggaacggagggagta 1
>54702_tae-miR1127:pmrd
Length = 150
Score = 87.7 bits (44), Expect = 2e-18
Identities = 97/116 (83%), Gaps = 9/116 (7%)
Strand = Plus / Plus
Query: 9 tactctttccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagtt 68
||||| ||||||||||||||||| ||| ||||| |||||||||| ||| |||||||||
Sbjct: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
Query: 69 ctagatacatc---------catttttgagacaagtaattccgaacggagggagta 115
|||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 79 gtagatacatccatttttatcatttttgtgacaagtaattccgaacggagggagta 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 16 tccgttcggaattacttgtc 35
||||||||||||||||||||
Sbjct: 127 tccgttcggaattacttgtc 108
>46909_ata-miR1122:pmrd
Length = 170
Score = 85.7 bits (43), Expect = 7e-18
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 16 tccgttcggaattacttgtcgtggaaatgaatgtatctagatgtattttagttctagata 75
||||| || ||||| |||||| |||||| ||||||||||| ||||||||||||||||||
Sbjct: 33 tccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagttctagata 92
Query: 76 catccattttt 86
|||||||||||
Sbjct: 93 catccattttt 103
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 68 tctagatacatccatttttgagacaagtaattccgaacggagggagta 115
||||||||||||||||| | ||||| ||||| || ||||||||||||
Sbjct: 73 tctagatacatccatttctccgacaaataatttcggacggagggagta 26
>54703_tae-miR1128:pmrd
Length = 188
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 46 atgtatctagatgtattttagttctagatacatcc 80
|||||||||||||||||||||||||||||||||||
Sbjct: 113 atgtatctagatgtattttagttctagatacatcc 79
>48322_bdi-miR1135:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 gacaagtaattccgaacggagggagt 114
||||||||||||||| ||||||||||
Sbjct: 105 gacaagtaattccgaccggagggagt 130
