miRNEST 2.0, an integrative microRNA resource :: BLAST
>54710_tae-miR1135:pmrd
Length = 109
Score = 121 bits (61), Expect = 1e-28
Identities = 96/105 (91%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatctaagaactaaaatacgtcta 82
|||||| ||||||||||||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 6 ccctccattcggaattacttgtctcggatatggatgtatct-agaactaaaatacgtcta 64
Query: 83 gatacatccatttc-gcgacgagtaattccgaacagagcgagtag 126
|||||||| ||||| ||||| ||||||||||||| ||| ||||||
Sbjct: 65 gatacatctatttctgcgacaagtaattccgaacggagggagtag 109
Score = 52.0 bits (26), Expect = 1e-07
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtctcggaaatgaatgtatcta 64
||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 104 ccctccgttcggaattacttgtcgcagaaatagatgtatcta 63
>46909_ata-miR1122:pmrd
Length = 170
Score = 69.9 bits (35), Expect = 5e-13
Identities = 45/47 (95%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 50 aaatgaatgtatctaagaactaaaatacgtctagatacatccatttc 96
||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101 aaatggatgtatcta-gaactaaaatacgtctagatacatccatttc 56
>54711_tae-miR1136:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 7e-09
Identities = 78/92 (84%), Gaps = 2/92 (2%)
Strand = Plus / Minus
Query: 35 aattacttgtctcggaaatgaatgtatctaagaactaaaatacgtctagatacatccatt 94
||||||| ||| | |||||| |||||| || |||||||||||| |||||||||||||||
Sbjct: 91 aattactcgtcgcagaaatggatgtattta-gaactaaaatacatctagatacatccata 33
Query: 95 tc-gcgacgagtaattccgaacagagcgagta 125
| ||||| |||||||| |||| ||| |||||
Sbjct: 32 cctgcgacaagtaattcggaacggagggagta 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 30/32 (93%), Gaps = 1/32 (3%)
Strand = Plus / Plus
Query: 79 tctagatacatccatttc-gcgacgagtaatt 109
|||| ||||||||||||| |||||||||||||
Sbjct: 60 tctaaatacatccatttctgcgacgagtaatt 91
>54703_tae-miR1128:pmrd
Length = 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 56 atgtatctaagaactaaaatacgtctagatacatcc 91
||||||||| |||||||||||| |||||||||||||
Sbjct: 81 atgtatcta-gaactaaaatacatctagatacatcc 115
>54702_tae-miR1127:pmrd
Length = 150
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 ccctccgttcggaattacttgtc 45
|||||||||||||||||||||||
Sbjct: 130 ccctccgttcggaattacttgtc 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 26 tccgttcggaattacttgtctcggaaatgaatgtatctaa 65
|||||||||||||||| ||| ||||| |||||||||||
Sbjct: 26 tccgttcggaattactcgtccaagaaataaatgtatctaa 65
