miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54710_tae-miR1135:pmrd
          Length = 109

 Score = 95.6 bits (48), Expect = 7e-21
 Identities = 91/104 (87%), Gaps = 1/104 (0%)
 Strand = Plus / Minus

                                                                       
Query: 13  ccctccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtccta 72
           ||||||||||||||||||||||||||||| || ||| ||||||||| ||| |  || |||
Sbjct: 104 ccctccgttcggaattacttgtcgcagaa-atagatgtatctagacgtattttagttcta 46

                                                       
Query: 73  gatacatccattttcgagacaagtaactccggacggagggagta 116
           ||||||||||| | |||||||||||| |||| | ||||||||||
Sbjct: 45  gatacatccatatccgagacaagtaattccgaatggagggagta 2



 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 70  ctagatacatccattttcgagacaagtaactccggacggagggagta 116
           ||||||||||| ||||  | ||||||||| |||| ||||||||||||
Sbjct: 62  ctagatacatctatttctgcgacaagtaattccgaacggagggagta 108




>46909_ata-miR1122:pmrd
          Length = 170

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 63/74 (85%), Gaps = 1/74 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  ccctccgttcggaattacttgtcgcagaacatggatatatctagacctatatgggtccta 72
           |||||||| || ||||| |||||| |||| |||||| ||||||||| ||| |  || |||
Sbjct: 30  ccctccgtccgaaattatttgtcggagaa-atggatgtatctagacgtattttagttcta 88

                         
Query: 73  gatacatccatttt 86
           ||||||||||||||
Sbjct: 89  gatacatccatttt 102




>54711_tae-miR1136:pmrd
          Length = 107

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 13 ccctccgttcggaattacttgtcgcag 39
          |||||||||| ||||||||||||||||
Sbjct: 5  ccctccgttccgaattacttgtcgcag 31




>54702_tae-miR1127:pmrd
          Length = 150

 Score = 46.1 bits (23), Expect = 6e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 13  ccctccgttcggaattacttgtc 35
           |||||||||||||||||||||||
Sbjct: 130 ccctccgttcggaattacttgtc 108



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 81  cattttcgagacaagtaactccggacggagggagta 116
           |||||| | ||||||||| |||| ||||||||||||
Sbjct: 99  catttttgtgacaagtaattccgaacggagggagta 134




>48322_bdi-miR1135:pmrd
          Length = 138

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 13  ccctccgttcggaattacttgtcg 36
           ||||||| ||||||||||||||||
Sbjct: 127 ccctccggtcggaattacttgtcg 104