miRNEST 2.0, an integrative microRNA resource :: BLAST
>54710_tae-miR1135:pmrd
Length = 109
Score = 145 bits (73), Expect = 9e-36
Identities = 96/105 (91%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||||||||||||||||||| | |||| |||||||||| || |||||||| |
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgtattttagtt 49
Query: 69 ctagatacatccatatccganacaagnaattccgaacggagggag 113
|||||||||||||||||||| ||||| ||||||||| ||||||||
Sbjct: 48 ctagatacatccatatccgagacaagtaattccgaatggagggag 4
Score = 58.0 bits (29), Expect = 2e-09
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||| |||||||||||||||| | ||||||||||||| | || || |
Sbjct: 2 tactccctccattcggaattacttgtctcggatatggatgtatctagaactaaaatacgt 61
Query: 69 ctagatacatccatatccganacaagnaattccgaacggagggag 113
||||||||||| || || | ||||| ||||||||||||||||||
Sbjct: 62 ctagatacatctatttctgcgacaagtaattccgaacggagggag 106
>46909_ata-miR1122:pmrd
Length = 170
Score = 87.7 bits (44), Expect = 2e-18
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||| || ||||| |||||| | ||||||||||||||| || |||||||| |
Sbjct: 26 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 85
Query: 69 ctagatacatccat 82
||||||||||||||
Sbjct: 86 ctagatacatccat 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggat 47
|||||||||||| ||||| ||||||| | | ||||||||
Sbjct: 142 tactccctccgtccggaactacttgttgcagaaatggat 104
>54711_tae-miR1136:pmrd
Length = 107
Score = 71.9 bits (36), Expect = 1e-13
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||||||||||| ||||||||||||| | ||||||||||||| | |||||||| |
Sbjct: 1 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 60
Query: 69 ctagatacatccat 82
||| ||||||||||
Sbjct: 61 ctaaatacatccat 74
Score = 50.1 bits (25), Expect = 4e-07
Identities = 84/105 (80%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
||||||||||||| ||||||| |||| | |||||||||||| || | || || |
Sbjct: 107 tactccctccgtttcaaattactcgtcgcagaaatggatgtatttagaactaaaatacat 48
Query: 69 ctagatacatccatatccganacaagnaattccgaacggagggag 113
||||||||||||||| | | ||||| ||||| ||||||||||||
Sbjct: 47 ctagatacatccatacctgcgacaagtaattcggaacggagggag 3
>54702_tae-miR1127:pmrd
Length = 150
Score = 56.0 bits (28), Expect = 6e-09
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 9 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttagnt 68
|||||| |||||||||||||||| ||| | |||| ||||||||||| ||||||| |
Sbjct: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
Query: 69 ctagatacatccat 82
|||||||||||||
Sbjct: 79 gtagatacatccat 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 9 tactccctccgttcggaattacttgtc 35
|||||||||||||||||||||||||||
Sbjct: 134 tactccctccgttcggaattacttgtc 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 90 acaagnaattccgaacggagggag 113
||||| ||||||||||||||||||
Sbjct: 109 acaagtaattccgaacggagggag 132
>48322_bdi-miR1135:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 10 actccctccgttcggaattacttgtcg 36
|||||||||| ||||||||||||||||
Sbjct: 130 actccctccggtcggaattacttgtcg 104
>54703_tae-miR1128:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 2e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 44 ggatgtatctaaacatattttagntctagatacatcc 80
||||||||||| | |||||||| |||||||||||||
Sbjct: 115 ggatgtatctagatgtattttagttctagatacatcc 79
