miRNEST 2.0, an integrative microRNA resource :: BLAST
>54710_tae-miR1135:pmrd
Length = 109
Score = 155 bits (78), Expect = 9e-39
Identities = 99/107 (92%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||||||||||||||||| | |||| |||||||||| || ||||||| ||
Sbjct: 108 tactccctccgttcggaattacttgtcgcagaaatagatgtatctagacgtattttagtt 49
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 48 ctagatacatccatatccgagacaagtaattccgaatggagggagta 2
Score = 67.9 bits (34), Expect = 2e-12
Identities = 88/107 (82%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||| |||||||||||||||| | ||||||||||||| | || || |
Sbjct: 2 tactccctccattcggaattacttgtctcggatatggatgtatctagaactaaaatacgt 61
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| ||||||| || || | |||||||||||||||||||||||||||
Sbjct: 62 ctagatacatctatttctgcgacaagtaattccgaacggagggagta 108
>54711_tae-miR1136:pmrd
Length = 107
Score = 83.8 bits (42), Expect = 3e-17
Identities = 90/107 (84%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||||| ||||||||||||| | ||||||||||||| | ||||||| ||
Sbjct: 1 tactccctccgttccgaattacttgtcgcaggtatggatgtatctagatgtattttagtt 60
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| |||||||||| || | ||| ||||||| |||||||||||||
Sbjct: 61 ctaaatacatccatttctgcgacgagtaatttgaaacggagggagta 107
Score = 60.0 bits (30), Expect = 4e-10
Identities = 87/107 (81%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
||||||||||||| ||||||| |||| | |||||||||||| || | || || |
Sbjct: 107 tactccctccgtttcaaattactcgtcgcagaaatggatgtatttagaactaaaatacat 48
Query: 79 ctanatacatccatatccgagacaagtaattccgaacggagggagta 125
||| ||||||||||| | | |||||||||||| ||||||||||||||
Sbjct: 47 ctagatacatccatacctgcgacaagtaattcggaacggagggagta 1
>46909_ata-miR1122:pmrd
Length = 170
Score = 81.8 bits (41), Expect = 1e-16
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||||||||| || ||||| |||||| | ||||||||||||||| || ||||||| ||
Sbjct: 26 tactccctccgtccgaaattatttgtcggagaaatggatgtatctagacgtattttagtt 85
Query: 79 ctanatacatccat 92
||| ||||||||||
Sbjct: 86 ctagatacatccat 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 34/39 (87%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggat 57
|||||||||||| ||||| ||||||| | | ||||||||
Sbjct: 142 tactccctccgtccggaactacttgttgcagaaatggat 104
>54702_tae-miR1127:pmrd
Length = 150
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 19 tactccctccgttcggaattacttgtc 45
|||||||||||||||||||||||||||
Sbjct: 134 tactccctccgttcggaattacttgtc 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 99 gacaagtaattccgaacggagggagta 125
|||||||||||||||||||||||||||
Sbjct: 108 gacaagtaattccgaacggagggagta 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 19 tactccctccgttcggaattacttgtcgtanaaatggatgtatctaaacatattttantt 78
|||||| |||||||||||||||| ||| | |||| ||||||||||| |||||| ||
Sbjct: 19 tactccttccgttcggaattactcgtccaagaaataaatgtatctaaatgcattttagtt 78
Query: 79 ctanatacatccat 92
|| ||||||||||
Sbjct: 79 gtagatacatccat 92
>48322_bdi-miR1135:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 20 actccctccgttcggaattacttgtcg 46
|||||||||| ||||||||||||||||
Sbjct: 130 actccctccggtcggaattacttgtcg 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 gacaagtaattccgaacggagggagt 124
||||||||||||||| ||||||||||
Sbjct: 105 gacaagtaattccgaccggagggagt 130
