miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score =  103 bits (52), Expect = 5e-23
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                       
Query: 72  gactacatacggagcaaaatgagtgaatctacattctaaaatatgtctatatacatccgt 131
           ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 245 gactacatacgaagtaaaatgagtgaatctacactctaaaatatgtctatatacatccgt 186

               
Query: 132 atgt 135
           ||||
Sbjct: 185 atgt 182




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 77.8 bits (39), Expect = 3e-15
 Identities = 97/115 (84%), Gaps = 1/115 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  tactccctccgttcctaaatatttgtctttctagagatttcaacaagtgactacatacgg 83
           ||||| ||||||||||||||||  |||||| |||| ||| ||  | | ||||||||||||
Sbjct: 2   tactctctccgttcctaaatataagtctttatagaaattccactatg-gactacatacgg 60

                                                                  
Query: 84  agcaaaatgagtgaatctacattctaaaatatgtctatatacatccgtatgtggt 138
           |||||||| | |||||||||| ||||||||   |||| |||||| ||||||||||
Sbjct: 61  agcaaaataaatgaatctacactctaaaatgcatctacatacattcgtatgtggt 115



 Score = 48.1 bits (24), Expect = 3e-06
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 24  tactccctccgttcctaaatatttgtctttctagagattt 63
           ||||||||||||| ||||||||  |||||| |||||||||
Sbjct: 163 tactccctccgtttctaaatataagtctttgtagagattt 124




>48647_hpi-miR1122:pmrd
          Length = 180

 Score = 58.0 bits (29), Expect = 3e-09
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                       
Query: 43 tatttgtctttctagagatttcaacaagt 71
          |||||||||||||||||||||||||||||
Sbjct: 29 tatttgtctttctagagatttcaacaagt 1




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 24 tactccctccgttcctaaatat 45
          ||||||||||||||||||||||
Sbjct: 6  tactccctccgttcctaaatat 27