miRNEST 2.0, an integrative microRNA resource :: BLAST
>54703_tae-miR1128:pmrd
Length = 188
Score = 174 bits (88), Expect = 1e-44
Identities = 117/127 (92%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||||||||||||||||||| |||||| | ||||||||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
|||||||||||||||||||||| ||| |||| | ||||||||||| |||||||| |||||
Sbjct: 94 taaaatacatctagatacatccccttctatccattttgatgacaactatttccggacgga 153
Query: 142 gggagta 148
|||||||
Sbjct: 154 gggagta 160
Score = 103 bits (52), Expect = 4e-23
Identities = 108/127 (85%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||||| ||||| |||||||||||||||||| || | ||||||||||||
Sbjct: 160 tactccctccgtccggaaatagttgtcatcaaaatggatagaaggggatgtatctagatg 101
Query: 82 taaaatacatctagatacatccncttttatctagtttgatgacaagtatttccgaacgga 141
|| || ||||||||||||| ||||||| | ||||||||||||||||| || |||||
Sbjct: 100 tattttagttctagatacatccccttttattcattttgatgacaagtattttcggacgga 41
Query: 142 gggagta 148
|||||||
Sbjct: 40 gggagta 34
>46909_ata-miR1122:pmrd
Length = 170
Score = 77.8 bits (39), Expect = 2e-15
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 53 aaatggataaaaagagatgtatctagaactaaaatacatctagatacatcc 103
||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 111 aaatggataaaaatggatgtatctagaactaaaatacgtctagatacatcc 61
>54711_tae-miR1136:pmrd
Length = 107
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Minus
Query: 68 gatgtatctagaactaaaatacatctagatacatcc 103
||||||| ||||||||||||||||||||||||||||
Sbjct: 71 gatgtatttagaactaaaatacatctagatacatcc 36
>54710_tae-miR1135:pmrd
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 68 gatgtatctagaactaaaatacatctagatacatc 102
|||||||||||||||||||||| ||||||||||||
Sbjct: 38 gatgtatctagaactaaaatacgtctagatacatc 72
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 122 gacaagtatttccgaacggagggagta 148
|||||||| ||||||||||||||||||
Sbjct: 82 gacaagtaattccgaacggagggagta 108
>54702_tae-miR1127:pmrd
Length = 150
Score = 56.0 bits (28), Expect = 8e-09
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 22 tactccctccgtccaaaaatacttgtcatcaaaatggataaaaagagatgtatctagaac 81
|||||||||||| | || ||||||||| ||||| |||||||| |||||||||| |||
Sbjct: 134 tactccctccgttcggaattacttgtca-caaaaatgataaaaatggatgtatctacaac 76
Query: 82 taaaatacatctagatacat 101
|||||| ||| |||||||||
Sbjct: 75 taaaatgcatttagatacat 56
Score = 56.0 bits (28), Expect = 8e-09
Identities = 52/59 (88%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 93 tagatacatccncttttatctagtttgatgacaagtatttccgaacggagggagtatat 151
||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||
Sbjct: 80 tagatacatccatttttatcatttttg-tgacaagtaattccgaacggagggagtatat 137
>48647_hpi-miR1122:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 22 tactccctccgtccaaaaatacttgtcat 50
|||||||||||||| ||||| ||||||||
Sbjct: 28 tactccctccgtcccaaaattcttgtcat 56
