miRNEST 2.0, an integrative microRNA resource :: BLAST
>54710_tae-miR1135:pmrd
Length = 109
Score = 85.7 bits (43), Expect = 8e-18
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 50 atggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtatttc 109
||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |||
Sbjct: 35 atggatgtatctagaactaaaatacgtcta-gatacatctatttctgcgacaagtaattc 93
Query: 110 cggacggagggagta 124
|| ||||||||||||
Sbjct: 94 cgaacggagggagta 108
>46909_ata-miR1122:pmrd
Length = 170
Score = 75.8 bits (38), Expect = 8e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||||||||||||||||||||||||| |||| |||||||| ||||| ||||| ||
Sbjct: 102 aaaatggatgtatctagaactaaaatacgtcta-gatacatccatttctccgacaaataa 44
Query: 107 ttccggacggagggagta 124
|| |||||||||||||||
Sbjct: 43 tttcggacggagggagta 26
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 99 acaagtatttccggacggagggagta 124
||||||| ||||||||||||||||||
Sbjct: 117 acaagtagttccggacggagggagta 142
>54703_tae-miR1128:pmrd
Length = 188
Score = 61.9 bits (31), Expect = 1e-10
Identities = 69/82 (84%), Gaps = 11/82 (13%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaatacttgtcatcaaaatg----------gatgtatctagaac 66
|||| ||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 34 tactccctccgtccgaaaatacttgtcatcaaaatgaataaaaggggatgtatctagaac 93
Query: 67 taaaatacatctatgatacatc 88
||||||||||||| ||||||||
Sbjct: 94 taaaatacatcta-gatacatc 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 96 atgacaagtatttccggacggagggagta 124
||||||||||||| |||||||||||||||
Sbjct: 62 atgacaagtattttcggacggagggagta 34
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 16 ttacttcctccgtccaaaaatacttgtcatcaaaatggat 55
||||| ||||||||| ||||| |||||||||||||||||
Sbjct: 161 ttactccctccgtccggaaatagttgtcatcaaaatggat 122
>54711_tae-miR1136:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Minus
Query: 48 aaatggatgtatctagaactaaaatacatctatgatacatc 88
|||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 76 aaatggatgtatttagaactaaaatacatcta-gatacatc 37
>54702_tae-miR1127:pmrd
Length = 150
Score = 52.0 bits (26), Expect = 1e-07
Identities = 66/78 (84%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 47 aaaatggatgtatctagaactaaaatacatctatgatacatctatttcaatgacaagtat 106
|||||||||||||||| ||||||||| ||| || ||||||| |||||| ||| ||||
Sbjct: 95 aaaatggatgtatctacaactaaaatgcattta-gatacatttatttcttggacgagtaa 37
Query: 107 ttccggacggagggagta 124
||||| ||||| ||||||
Sbjct: 36 ttccgaacggaaggagta 19
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 97 tgacaagtatttccggacggagggagta 124
||||||||| ||||| ||||||||||||
Sbjct: 107 tgacaagtaattccgaacggagggagta 134
>50995_osa-miRf11780-akr:pmrd
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 17 tacttcctccgtccaaaaata 37
|||||||||||||||||||||
Sbjct: 2 tacttcctccgtccaaaaata 22
