miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 35/35 (100%)
 Strand = Plus / Plus

                                             
Query: 16 tactccctccgtcccataatataagaacatttttg 50
          |||||||||||||||||||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataagaacatttttg 52



 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                     
Query: 16 tactccctccgtcccataatataagaa 42
          ||||||||||||| |||||||||||||
Sbjct: 99 tactccctccgtctcataatataagaa 73




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 58.0 bits (29), Expect = 1e-09
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 12  aatctactccctccgtcccataatataag 40
           |||||||||||||||||||||||||||||
Sbjct: 125 aatctactccctccgtcccataatataag 97



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgtcccataatataag 40
          |||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccataatataag 31




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 52.0 bits (26), Expect = 8e-08
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                    
Query: 15 ctactccctccgtcccataatataag 40
          ||||||||||||||||||||||||||
Sbjct: 9  ctactccctccgtcccataatataag 34



 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 16  tactccctccgtcccataatataag 40
           |||||||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataag 89




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgtcccataatataag 40
          |||||||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 16 tactccctccgtcccataatataag 40
          |||||||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 16 tactccctccgtcccataatataag 40
          |||||||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataatataag 73




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 16  tactccctccgtcccataatataag 40
           |||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataag 103




>50953_osa-miRf11738-akr:pmrd
          Length = 162

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 12  aatctactccctccgtcccataa 34
           |||||||||||||||||||||||
Sbjct: 155 aatctactccctccgtcccataa 133




>49787_osa-miRf10572-akr:pmrd
          Length = 109

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 13  atctactccctccgtcccataat 35
           |||||||||||||||||||||||
Sbjct: 104 atctactccctccgtcccataat 82



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataat 28




>49786_osa-miRf10571-akr:pmrd
          Length = 109

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 13  atctactccctccgtcccataat 35
           |||||||||||||||||||||||
Sbjct: 104 atctactccctccgtcccataat 82



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 16 tactccctccgtcccataat 35
          ||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataat 28




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 15 ctactccctccgtcccataatat 37
          |||||||||||||||||||||||
Sbjct: 11 ctactccctccgtcccataatat 33



 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 15  ctactccctccgtcccataat 35
           |||||||||||||||||||||
Sbjct: 143 ctactccctccgtcccataat 123




>49126_osa-miR1442:pmrd
          Length = 185

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 15  ctactccctccgtcccataatataag 40
           ||||||| ||||||||||||||||||
Sbjct: 116 ctactccatccgtcccataatataag 141




>50920_osa-miRf11705-akr:pmrd
          Length = 134

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 15  ctactccctccgtcccataatataa 39
           ||||||||||||||||| |||||||
Sbjct: 123 ctactccctccgtcccaaaatataa 99




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 16 tactccctccgtcccataatataag 40
          ||||||||||||||||| |||||||
Sbjct: 31 tactccctccgtcccatgatataag 7




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 16 tactccctccgtcccataatataag 40
          ||||||||||||||||| |||||||
Sbjct: 34 tactccctccgtcccatgatataag 10




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 16 tactccctccgtcccataatataag 40
          |||||||||||||||| ||||||||
Sbjct: 92 tactccctccgtcccaaaatataag 68




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 21 cctccgtcccataatataaga 41
          |||||||||||||||||||||
Sbjct: 1  cctccgtcccataatataaga 21



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cctccgtcccataatataag 40
           ||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94