miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54697_tae-miR1122:pmrd
          Length = 295

 Score =  103 bits (52), Expect = 5e-23
 Identities = 61/64 (95%)
 Strand = Plus / Plus

                                                                       
Query: 64  acatacggatgtatgtagacatattttagagtttagattcactcattttactccgtatgt 123
           |||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 182 acatacggatgtatatagacatattttagagtgtagattcactcattttacttcgtatgt 241

               
Query: 124 agtc 127
           ||||
Sbjct: 242 agtc 245



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 153 agtatttaggaacggagggagtact 177
           ||||||||||||| |||||||||||
Sbjct: 28  agtatttaggaacagagggagtact 4



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 9   ttatactccctccgttcctaaatacttgtctt 40
           ||||||||||||||| || |||| ||||||||
Sbjct: 154 ttatactccctccgtcccaaaattcttgtctt 123




>54701_tae-miR1126:pmrd
          Length = 164

 Score = 65.9 bits (33), Expect = 1e-11
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 63  cacatacggatgtatgtagacatattttagagtttagattcactcattttactccgtatg 122
           |||||||| |||||||||||   |||||||||| |||||||| | ||||| |||||||||
Sbjct: 113 cacatacgaatgtatgtagatgcattttagagtgtagattcatttattttgctccgtatg 54

                
Query: 123 tagtc 127
           |||||
Sbjct: 53  tagtc 49




>50531_osa-miRf11316-akr:pmrd
          Length = 82

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 155 tatttaggaacggagggagtac 176
           ||||||||||||||||||||||
Sbjct: 26  tatttaggaacggagggagtac 5



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tactccctccgttcctaaata 32
          |||||||||||||||||||||
Sbjct: 6  tactccctccgttcctaaata 26




>49950_osa-miRf10735-akr:pmrd
          Length = 131

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 155 tatttaggaacggagggagtacta 178
           |||||||| |||||||||||||||
Sbjct: 27  tatttagggacggagggagtacta 4