miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>54695_tae-miR1120:pmrd
          Length = 119

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 13 tactccctccgtcccataatataagaa 39
          |||||||||||||||||||||||||||
Sbjct: 18 tactccctccgtcccataatataagaa 44



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 11  aatactccctccgtcccataatataagaa 39
           ||||||||||||||| |||||||||||||
Sbjct: 101 aatactccctccgtctcataatataagaa 73




>51250_osa-miRf12035-akr:pmrd
          Length = 119

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 12  atactccctccgtcccataatataag 37
           ||||||||||||||||||||||||||
Sbjct: 114 atactccctccgtcccataatataag 89



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34




>50738_osa-miRf11523-akr:pmrd
          Length = 108

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                    
Query: 12 atactccctccgtcccataatataag 37
          ||||||||||||||||||||||||||
Sbjct: 98 atactccctccgtcccataatataag 73




>51255_osa-miRf12040-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 9  ataatactccctccgtcccataatataag 37
          |||||||||||||  ||||||||||||||
Sbjct: 98 ataatactccctctctcccataatataag 70




>51254_osa-miRf12039-akr:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 9  tactccctccgtcccataatataag 33



 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                       
Query: 9  ataatactccctccgtcccataatataag 37
          |||||||||||||  ||||||||||||||
Sbjct: 98 ataatactccctctctcccataatataag 70




>50587_osa-miRf11372-akr:pmrd
          Length = 126

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccataatataag 31



 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 13  tactccctccgtcccataatataag 37
           |||||||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataatataag 97




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 13  tactccctccgtcccataatataag 37
           |||||||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataatataag 103




>49126_osa-miR1442:pmrd
          Length = 185

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 8   tataatactccctccgtcccataatataag 37
           |||| |||||| ||||||||||||||||||
Sbjct: 112 tatactactccatccgtcccataatataag 141




>49120_osa-miR1436:pmrd
          Length = 161

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 13 tactccctccgtcccataatat 34
          ||||||||||||||||||||||
Sbjct: 12 tactccctccgtcccataatat 33



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 13  tactccctccgtcccataat 32
           ||||||||||||||||||||
Sbjct: 142 tactccctccgtcccataat 123




>50397_osa-miRf11182-akr:pmrd
          Length = 80

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 atactccctccgtcccataat 32
          |||||||||||||||||||||
Sbjct: 69 atactccctccgtcccataat 49




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 13 tactccctccgtcccataatataag 37
          ||||||||||||||||| |||||||
Sbjct: 31 tactccctccgtcccatgatataag 7




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 13 tactccctccgtcccataatataag 37
          ||||||||||||||||| |||||||
Sbjct: 34 tactccctccgtcccatgatataag 10




>49818_osa-miRf10603-akr:pmrd
          Length = 97

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 13 tactccctccgtcccataatataag 37
          |||||||||||||||| ||||||||
Sbjct: 92 tactccctccgtcccaaaatataag 68




>49537_osa-miRf10322-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 atactccctccgtcccataatataa 36
          ||||||||||||||||| |||||||
Sbjct: 9  atactccctccgtcccaaaatataa 33




>49536_osa-miRf10321-akr:pmrd
          Length = 105

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 12 atactccctccgtcccataatataa 36
          ||||||||||||||||| |||||||
Sbjct: 9  atactccctccgtcccaaaatataa 33




>49517_osa-miRf10302-akr:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 11 aatactccctccgtcccataatata 35
          |||||||||||||||||| ||||||
Sbjct: 5  aatactccctccgtcccaaaatata 29



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 12 atactccctccgtcccataatata 35
          ||||||||||||||||| ||||||
Sbjct: 98 atactccctccgtcccaaaatata 75




>49068_osa-miR818b:pmrd
          Length = 113

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 18 cctccgtcccataatataaga 38
          |||||||||||||||||||||
Sbjct: 1  cctccgtcccataatataaga 21



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 18  cctccgtcccataatataag 37
           ||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94