miRNEST 2.0, an integrative microRNA resource :: BLAST
>54695_tae-miR1120:pmrd
Length = 119
Score = 54.0 bits (27), Expect = 2e-08
Identities = 72/85 (84%), Gaps = 4/85 (4%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataatacaagagcgtttt-gacactacattagtgtaaaaaacgct 71
||||||||||||| ||||||| |||| ||||| ||||||||| | || ||||| | |
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacact---gtcaaaaatgtt 43
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 42 cttatattatgggacggagggagta 18
Score = 46.1 bits (23), Expect = 5e-06
Identities = 71/85 (83%), Gaps = 4/85 (4%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataatacaagagc-gttttgacactacattagtgtaaaaaacgct 71
||||||||||||||||||||| |||| | |||||||| | |||||| |||||| |
Sbjct: 18 tactccctccgtcccataatataagaacatttttgacagt---gtagtgtcaaaaacatt 74
Query: 72 cttatattatgggacggggggagta 96
||||||||||| ||||| |||||||
Sbjct: 75 cttatattatgagacggagggagta 99
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 atctactccctccgtcccataata 33
||||||||||||||||||||||||
Sbjct: 124 atctactccctccgtcccataata 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 72 cttatattatgggacggggggagtag 97
||||||||||||||||| ||||||||
Sbjct: 97 cttatattatgggacggagggagtag 122
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 31 cttatattatgggacggagggagta 7
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataata 33
|||||||||||||||||||||
Sbjct: 7 tactccctccgtcccataata 27
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 72 cttatattatgggacggggggagtagt 98
||||||||||||||||| |||||||||
Sbjct: 34 cttatattatgggacggagggagtagt 8
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ctactccctccgtcccataata 33
||||||||||||||||||||||
Sbjct: 9 ctactccctccgtcccataata 30
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 89 cttatattatgggacggagggagta 113
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataata 33
|||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataata 93
>49787_osa-miRf10572-akr:pmrd
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 atctactccctccgtcccataat 32
|||||||||||||||||||||||
Sbjct: 104 atctactccctccgtcccataat 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataat 32
||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataat 28
>49786_osa-miRf10571-akr:pmrd
Length = 109
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 10 atctactccctccgtcccataat 32
|||||||||||||||||||||||
Sbjct: 104 atctactccctccgtcccataat 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataat 32
||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataat 28
>50953_osa-miRf11738-akr:pmrd
Length = 162
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 10 atctactccctccgtcccataa 31
||||||||||||||||||||||
Sbjct: 154 atctactccctccgtcccataa 133
>49126_osa-miR1442:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 72 cttatattatgggacggggggagtagtata 101
||||||||||||||||| |||||||||||
Sbjct: 141 cttatattatgggacggatggagtagtata 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 8 agatctactccctccgtcccataa 31
||||||||||||| ||||||||||
Sbjct: 73 agatctactcccttcgtcccataa 50
>49120_osa-miR1436:pmrd
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ctactccctccgtcccataata 33
||||||||||||||||||||||
Sbjct: 11 ctactccctccgtcccataata 32
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 12 ctactccctccgtcccataat 32
|||||||||||||||||||||
Sbjct: 143 ctactccctccgtcccataat 123
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 33 cttatattatgggacggagggagta 9
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataata 33
|||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataata 29
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 33 cttatattatgggacggagggagta 9
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataata 33
|||||||||||||||||||||
Sbjct: 9 tactccctccgtcccataata 29
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 73 cttatattatgggacggagggagta 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataata 33
|||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataata 77
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataatacaag 37
||||||||||||||| |||||||||
Sbjct: 34 tactccctccgtcccctaatacaag 10
>49070_osa-miR818d:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 72 cttatattatgggacggggggagta 96
||||||||||||||||| |||||||
Sbjct: 103 cttatattatgggacggagggagta 127
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataata 33
|||||||||||||||||||||
Sbjct: 127 tactccctccgtcccataata 107
>50820_osa-miRf11605-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 10 atctactccctccgtcccataata 33
||||||||||||||||||| ||||
Sbjct: 98 atctactccctccgtcccaaaata 75
>50819_osa-miRf11604-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 10 atctactccctccgtcccataata 33
||||||||||||||||||| ||||
Sbjct: 98 atctactccctccgtcccaaaata 75
>50818_osa-miRf11603-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 10 atctactccctccgtcccataata 33
||||||||||||||||||| ||||
Sbjct: 4 atctactccctccgtcccaaaata 27
>50397_osa-miRf11182-akr:pmrd
Length = 80
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataat 32
||||||||||||||||||||
Sbjct: 68 tactccctccgtcccataat 49
>49621_osa-miRf10406-akr:pmrd
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 13 tactccctccgtcccataat 32
||||||||||||||||||||
Sbjct: 106 tactccctccgtcccataat 87
>49304_osa-miRf10089-akr:pmrd
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 tactccctccgtcccataat 32
||||||||||||||||||||
Sbjct: 1 tactccctccgtcccataat 20
