miRNEST 2.0, an integrative microRNA resource :: BLAST
>54757_tmo-miR1122:pmrd
Length = 180
Score = 159 bits (80), Expect = 7e-40
Identities = 118/130 (90%), Gaps = 3/130 (2%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagtta 70
||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||
Sbjct: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
Query: 71 cattttagtgttagatacattcgtat---gacaaatctaagacaagaattttgggacaga 127
|||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||
Sbjct: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 145
Query: 128 gggagtacta 137
|||| |||||
Sbjct: 146 gggaatacta 155
Score = 73.8 bits (37), Expect = 3e-14
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 66
||||||| ||||||||||||||||||| |||||| || |||||||||||||||
Sbjct: 149 tccctccatcccaaaattcttgtcttacatttgtttagatacggatgtatcta 97
>48647_hpi-miR1122:pmrd
Length = 180
Score = 151 bits (76), Expect = 2e-37
Identities = 116/129 (89%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 9 aatactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagt 68
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 26 aatactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagt 85
Query: 69 tacattttagtgttagatacattcgtat---gacaaatctaagacaagaattttgggaca 125
| ||||||||||||| |||||| ||| ||||||||||||| |||||||||||||
Sbjct: 86 catgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggacg 145
Query: 126 gagggagta 134
|||||||||
Sbjct: 146 gagggagta 154
Score = 63.9 bits (32), Expect = 3e-11
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 9 aatactccctccgtcccaaaattcttgtcttaaatttgt 47
||||||||||||||||||||||||| |||||| ||||||
Sbjct: 156 aatactccctccgtcccaaaattctngtcttagatttgt 118
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 97 gacaaatctaagacaagaattttgggacagagggagta 134
|||||||||| ||||||||||||||||| |||||||||
Sbjct: 65 gacaaatctatgacaagaattttgggacggagggagta 28
>54697_tae-miR1122:pmrd
Length = 295
Score = 125 bits (63), Expect = 9e-30
Identities = 113/129 (87%), Gaps = 3/129 (2%)
Strand = Plus / Plus
Query: 9 aatactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagt 68
||||||||||||||||||||| | ||| |||| ||||||||||||||| ||||||| |||
Sbjct: 23 aatactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagt 82
Query: 69 tacattttagtgttagatacattcgtat---gacaaatctaagacaagaattttgggaca 125
| ||||||| |||||||||| ||||| ||| ||||||||||||||||||||||||
Sbjct: 83 catgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacg 142
Query: 126 gagggagta 134
|||||||||
Sbjct: 143 gagggagta 151
Score = 89.7 bits (45), Expect = 5e-19
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 66
||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||
Sbjct: 152 atactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatcta 96
>54762_tur-miR1122:pmrd
Length = 180
Score = 93.7 bits (47), Expect = 3e-20
Identities = 100/117 (85%), Gaps = 3/117 (2%)
Strand = Plus / Plus
Query: 21 gtcccaaaattcttgtcttaaatttgtctaaatacggatgtatctagttacattttagtg 80
|||| |||||| ||||||| ||||||||| ||||| |||||| || | |||||||||||
Sbjct: 36 gtcctaaaatttgtgtcttagatttgtctacatacgaatgtatttattcacattttagtg 95
Query: 81 ttagatacattcgtat---gacaaatctaagacaagaattttgggacagagggagta 134
|||||||||||||||| | |||| ||||| ||||||||||||||||||| ||||
Sbjct: 96 ttagatacattcgtatttaaataaatttaagataagaattttgggacagaggaagta 152
Score = 65.9 bits (33), Expect = 8e-12
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaattcttgtcttaaatttgtctaaatacggatgtatcta 66
||||| |||| |||||||||||||| |||||||||| | |||||||| |||||||||
Sbjct: 153 atacttcctctgtcccaaaattcttatcttaaatttatttaaatacgaatgtatcta 97
>48320_bdi-miR1122:pmrd
Length = 180
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 35 gtcttaaatttgtctaaatacggatgtatcta 66
|||| ||||||||| |||||||||||||||||
Sbjct: 95 gtctcaaatttgtccaaatacggatgtatcta 64
>48322_bdi-miR1135:pmrd
Length = 138
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 32 cttgtcttaaatttgtctaaatacggatgtatcta 66
||||||| ||||||| | |||||||||||||||||
Sbjct: 36 cttgtctcaaatttgcccaaatacggatgtatcta 70
>49517_osa-miRf10302-akr:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 aatactccctccgtcccaaaat 30
||||||||||||||||||||||
Sbjct: 5 aatactccctccgtcccaaaat 26
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 98 atactccctccgtcccaaaat 78
>49958_osa-miRf10743-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 11 atactccctccgtcccaaaat 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 110 tactccctccgtcccaaaat 91
>49957_osa-miRf10742-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 116 atactccctccgtcccaaaat 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 17 tactccctccgtcccaaaat 36
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 9 atactccctccgtcccaaaat 29
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 9 atactccctccgtcccaaaat 29
>49366_osa-miRf10151-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 80 atactccctccgtcccaaaat 60
>49156_osa-miR1862e:pmrd
Length = 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 92 atactccctccgtcccaaaat 72
>49155_osa-miR1862d:pmrd
Length = 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 115 attttgggacagagggagtac 135
|||||||||||||||||||||
Sbjct: 48 attttgggacagagggagtac 28
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 123 atactccctccgtcccaaaat 103
>49152_osa-miR1862a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 88 atactccctccgtcccaaaat 68
>48648_hpr-miR1120:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaat 30
|||||||||||||||||||||
Sbjct: 81 atactccctccgtcccaaaat 61
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 6 tactccctccgtcccaaaat 25
>50953_osa-miRf11738-akr:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 atactccctccgtcccaaaa 29
||||||||||||||||||||
Sbjct: 9 atactccctccgtcccaaaa 28
>50920_osa-miRf11705-akr:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 122 tactccctccgtcccaaaat 103
>50834_osa-miRf11619-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 115 attttgggacagagggagta 134
||||||||||||||||||||
Sbjct: 29 attttgggacagagggagta 10
>50833_osa-miRf11618-akr:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 115 attttgggacagagggagta 134
||||||||||||||||||||
Sbjct: 114 attttgggacagagggagta 133
>50820_osa-miRf11605-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaat 76
>50819_osa-miRf11604-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaat 76
>50818_osa-miRf11603-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 7 tactccctccgtcccaaaat 26
>50305_osa-miRf11090-akr:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 115 attttgggacagagggagta 134
||||||||||||||||||||
Sbjct: 89 attttgggacagagggagta 108
>50275_osa-miRf11060-akr:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 119 tgggacagagggagtactagctag 142
|||||| |||||||||||||||||
Sbjct: 16 tgggacggagggagtactagctag 39
>50274_osa-miRf11059-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 119 tgggacagagggagtactagctag 142
|||||| |||||||||||||||||
Sbjct: 19 tgggacggagggagtactagctag 42
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 92 tactccctccgtcccaaaat 73
>49784_osa-miRf10569-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaat 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 115 attttgggacagagggagta 134
||||||||||||||||||||
Sbjct: 104 attttgggacagagggagta 123
>49783_osa-miRf10568-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 11 tactccctccgtcccaaaat 30
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 115 attttgggacagagggagta 134
||||||||||||||||||||
Sbjct: 104 attttgggacagagggagta 123
>49596_osa-miRf10381-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 1 tactccctccgtcccaaaat 20
>49433_osa-miRf10218-akr:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 atactccctccgtcccaaaa 29
||||||||||||||||||||
Sbjct: 10 atactccctccgtcccaaaa 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 10 atactccctccgtcccaaaa 29
||||||||||||||||||||
Sbjct: 84 atactccctccgtcccaaaa 65
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 115 attttgggacagagggagtactag 138
|||||||||| |||||||||||||
Sbjct: 33 attttgggacggagggagtactag 10
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 tactccctccgtcccaaaat 30
||||||||||||||||||||
Sbjct: 14 tactccctccgtcccaaaat 33
