miRNEST 2.0, an integrative microRNA resource :: BLAST
>54697_tae-miR1122:pmrd
Length = 295
Score = 200 bits (101), Expect = 2e-52
Identities = 122/129 (94%)
Strand = Plus / Plus
Query: 12 atactccctccgtccccaaattcttgtcttagatttgtctaaatacggatgtatcaagtc 71
|||||||||||||||| ||| | ||| |||||||||||||||||||| ||||||||||||
Sbjct: 24 atactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtc 83
Query: 72 atgttttagtattagacacatccgtatctagacgaatctaagacaagaattttgggacgg 131
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 84 atgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
Query: 132 agggagtat 140
|||||||||
Sbjct: 144 agggagtat 152
Score = 85.7 bits (43), Expect = 9e-18
Identities = 52/55 (94%)
Strand = Plus / Minus
Query: 12 atactccctccgtccccaaattcttgtcttagatttgtctaaatacggatgtatc 66
|||||||||||||||| |||||||||||||||||| ||||| |||||||||||||
Sbjct: 152 atactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatc 98
>48647_hpi-miR1122:pmrd
Length = 180
Score = 186 bits (94), Expect = 3e-48
Identities = 120/129 (93%)
Strand = Plus / Plus
Query: 12 atactccctccgtccccaaattcttgtcttagatttgtctaaatacggatgtatcaagtc 71
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 27 atactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagtc 86
Query: 72 atgttttagtattagacacatccgtatctagacgaatctaagacaagaattttgggacgg 131
|||||||||| |||||||||| | |||||| || |||||||||| |||||||||||||||
Sbjct: 87 atgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggacgg 146
Query: 132 agggagtat 140
|||||||||
Sbjct: 147 agggagtat 155
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 84 tagacacatccgtatctagacgaatctaagacaagaattttgggacggagggagtat 140
|||| |||||||||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 83 tagatacatccgtatttagacaaatctatgacaagaattttgggacggagggagtat 27
>54757_tmo-miR1122:pmrd
Length = 180
Score = 127 bits (64), Expect = 3e-30
Identities = 109/124 (87%)
Strand = Plus / Plus
Query: 13 tactccctccgtccccaaattcttgtcttagatttgtctaaatacggatgtatcaagtca 72
||||||||||||||| ||||| |||||||| ||||||||||||| |||||||| ||| |
Sbjct: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
Query: 73 tgttttagtattagacacatccgtatctagacgaatctaagacaagaattttgggacgga 132
||||||| ||||| ||||||||||||| || ||| ||||||||||||||||||| |||
Sbjct: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaattttgggatgga 145
Query: 133 ggga 136
||||
Sbjct: 146 ggga 149
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 89 acatccgtatctagacgaatctaagacaagaattttgggacggagggagta 139
|||||| ||| ||||| ||| |||||||| |||||||||||||||||||||
Sbjct: 76 acatccatatttagacaaatttaagacaacaattttgggacggagggagta 26
Score = 61.9 bits (31), Expect = 1e-10
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 16 tccctccgtccccaaattcttgtcttagatttgtctaaatacggatgtatc 66
||||||| |||| |||||||||||||| |||||| || |||||||||||||
Sbjct: 149 tccctccatcccaaaattcttgtcttacatttgtttagatacggatgtatc 99
>54762_tur-miR1122:pmrd
Length = 180
Score = 65.9 bits (33), Expect = 8e-12
Identities = 87/105 (82%)
Strand = Plus / Plus
Query: 36 tgtcttagatttgtctaaatacggatgtatcaagtcatgttttagtattagacacatccg 95
||||||||||||||||| ||||| |||||| | ||| ||||||| ||||| |||| ||
Sbjct: 49 tgtcttagatttgtctacatacgaatgtatttattcacattttagtgttagatacattcg 108
Query: 96 tatctagacgaatctaagacaagaattttgggacggagggagtat 140
||| || | ||| ||||| |||||||||||||| |||| |||||
Sbjct: 109 tatttaaataaatttaagataagaattttgggacagaggaagtat 153
>49155_osa-miR1862d:pmrd
Length = 150
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtatcat 143
||||||||||||||||||||||||
Sbjct: 103 attttgggacggagggagtatcat 126
>49156_osa-miR1862e:pmrd
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtatc 141
||||||||||||||||||||||
Sbjct: 72 attttgggacggagggagtatc 93
>49958_osa-miRf10743-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 31 attttgggacggagggagtat 11
Score = 42.1 bits (21), Expect = 1e-04
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagta-tcatttat 147
|||||||||||||||||||| ||||||||
Sbjct: 91 attttgggacggagggagtagtcatttat 119
>49957_osa-miRf10742-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta-tcatttat 147
|||||||||||||||||||| ||||||||
Sbjct: 36 attttgggacggagggagtagtcatttat 8
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 96 attttgggacggagggagtat 116
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 29 attttgggacggagggagtat 9
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 29 attttgggacggagggagtat 9
>49517_osa-miRf10302-akr:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 26 attttgggacggagggagtat 6
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 78 attttgggacggagggagtat 98
>49366_osa-miRf10151-akr:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 60 attttgggacggagggagtat 80
>49152_osa-miR1862a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 68 attttgggacggagggagtat 88
>48648_hpr-miR1120:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagtat 140
|||||||||||||||||||||
Sbjct: 61 attttgggacggagggagtat 81
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 25 attttgggacggagggagta 6
>46909_ata-miR1122:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 126 ggacggagggagtatcattta 146
|||||||||||||||||||||
Sbjct: 129 ggacggagggagtatcattta 149
>50953_osa-miRf11738-akr:pmrd
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 ttttgggacggagggagtat 140
||||||||||||||||||||
Sbjct: 28 ttttgggacggagggagtat 9
>50920_osa-miRf11705-akr:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 103 attttgggacggagggagta 122
>50820_osa-miRf11605-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 76 attttgggacggagggagta 95
>50819_osa-miRf11604-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 76 attttgggacggagggagta 95
>50818_osa-miRf11603-akr:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 26 attttgggacggagggagta 7
>49818_osa-miRf10603-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 73 attttgggacggagggagta 92
>49784_osa-miRf10569-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 30 attttgggacggagggagta 11
>49783_osa-miRf10568-akr:pmrd
Length = 132
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 30 attttgggacggagggagta 11
>49596_osa-miRf10381-akr:pmrd
Length = 147
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 20 attttgggacggagggagta 1
>49433_osa-miRf10218-akr:pmrd
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 121 ttttgggacggagggagtat 140
||||||||||||||||||||
Sbjct: 29 ttttgggacggagggagtat 10
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 121 ttttgggacggagggagtat 140
||||||||||||||||||||
Sbjct: 65 ttttgggacggagggagtat 84
>49314_osa-miRf10099-akr:pmrd
Length = 144
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 120 attttgggacggagggagta 139
||||||||||||||||||||
Sbjct: 33 attttgggacggagggagta 14
