miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48648_hpr-miR1120:pmrd
          Length = 85

 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                         
Query: 27 tactccctccgtcccaaaataagtgtctcaa 57
          ||||||||||||||||||||||||| |||||
Sbjct: 6  tactccctccgtcccaaaataagtgactcaa 36



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 82  ttagtacaaagttaagacacttattttgggacggaggaagtat 124
           |||||| |||||| || |||||||||||||||||||| |||||
Sbjct: 39  ttagtataaagttgagtcacttattttgggacggagggagtat 81



 Score = 54.0 bits (27), Expect = 3e-08
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                         
Query: 27 tactccctccgtcccaaaataagtgtctcaa 57
          ||||||||||||||||||||||||| |||||
Sbjct: 80 tactccctccgtcccaaaataagtgactcaa 50



 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 89  aaagttaagacacttattttgggacggaggaagta 123
           |||||| || |||||||||||||||||||| ||||
Sbjct: 40  aaagttgagtcacttattttgggacggagggagta 6




>54712_tae-miR1137:pmrd
          Length = 148

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 70  tttgtactaaagttagtacaaagttaagacacttattttgggacggaggaagta 123
           ||||||||||||||||||||||||| || ||  |||| ||| ||||||| ||||
Sbjct: 60  tttgtactaaagttagtacaaagttgagtcatctattctggaacggagggagta 113




>50485_osa-miRf11270-akr:pmrd
          Length = 82

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                   
Query: 21 atgaagtactccctccgtcccaaaa 45
          |||||||||||||||||||||||||
Sbjct: 82 atgaagtactccctccgtcccaaaa 58




>49596_osa-miRf10381-akr:pmrd
          Length = 147

 Score = 50.1 bits (25), Expect = 5e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 27 tactccctccgtcccaaaataagtg 51
          |||||||||||||||||||||||||
Sbjct: 1  tactccctccgtcccaaaataagtg 25



 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 99  cacttattttgggacggaggaagta 123
           |||||||||||||||||||| ||||
Sbjct: 25  cacttattttgggacggagggagta 1




>50820_osa-miRf11605-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 27 tactccctccgtcccaaaataagt 50
          ||||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 100 acttattttgggacggaggaagta 123
           ||||||||||||||||||| ||||
Sbjct: 72  acttattttgggacggagggagta 95




>50819_osa-miRf11604-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                  
Query: 27 tactccctccgtcccaaaataagt 50
          ||||||||||||||||||||||||
Sbjct: 95 tactccctccgtcccaaaataagt 72



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 100 acttattttgggacggaggaagta 123
           ||||||||||||||||||| ||||
Sbjct: 72  acttattttgggacggagggagta 95




>50818_osa-miRf11603-akr:pmrd
          Length = 101

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 27 tactccctccgtcccaaaataagt 50
          ||||||||||||||||||||||||
Sbjct: 7  tactccctccgtcccaaaataagt 30



 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 acttattttgggacggaggaagta 123
           ||||||||||||||||||| ||||
Sbjct: 30  acttattttgggacggagggagta 7