miRNEST 2.0, an integrative microRNA resource :: BLAST
>48493_ghr-miR162a:pmrd
Length = 148
Score = 131 bits (66), Expect = 2e-31
Identities = 96/105 (91%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 19 gggtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac 78
|||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |
Sbjct: 13 gggtaaagacactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaa 72
Query: 79 taacacaa--acatgaatcggtcgataaacctctgcatccagcgc 121
|||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 73 taacacaaatacatgaatcgatcgataaacctctgcatccagcgc 117
>48423_cpa-miR162a:pmrd
Length = 109
Score = 111 bits (56), Expect = 1e-25
Identities = 95/104 (91%), Gaps = 3/104 (2%)
Strand = Plus / Plus
Query: 18 agggtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgaca 77
||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |
Sbjct: 1 agggtaaagtcactggaggcagcggttcatcgatctcttcctggg-aatttggtgtga-a 58
Query: 78 ctaacaca-aacatgaatcggtcgataaacctctgcatccagcg 120
| |||| ||||||||||| |||||||||||||||||||||||
Sbjct: 59 aaatcacagaacatgaatcgatcgataaacctctgcatccagcg 102
>54387_rco-miR162:pmrd
Length = 96
Score = 91.7 bits (46), Expect = 1e-19
Identities = 85/96 (88%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 28 cactggaggcagcggttcatcgatctcttcctggga-aatttgttgtgacactaacacaa 86
|||||||||||||||||||||||||||||||||| | | |||||||||| || || | ||
Sbjct: 1 cactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataa 60
Query: 87 a---catgaatcggtcgataaacctctgcatccagc 119
| ||||||||| ||||||||||||||||||||||
Sbjct: 61 aacgcatgaatcgatcgataaacctctgcatccagc 96
>54784_vvi-miR162:pmrd
Length = 103
Score = 85.7 bits (43), Expect = 8e-18
Identities = 91/105 (86%), Gaps = 4/105 (3%)
Strand = Plus / Plus
Query: 22 tgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacactaa 81
||||||||||||| ||||||||||||||||||||||||| || ||||||||| | |
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctg---aaattgttgtgaaaaaag 57
Query: 82 cacaaacatgaatcggtcgataaacctctgcatccagcgctcact 126
|| | || |||||||||||||||||||||||||||||| |||||
Sbjct: 58 ca-gatcaagaatcggtcgataaacctctgcatccagcgttcact 101
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 81.8 bits (41), Expect = 1e-16
Identities = 88/102 (86%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttg--tgacacta 80
|||| |||||||||||||||||||||||||||||||||| ||||| ||| | ||| |
Sbjct: 102 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 43
Query: 81 acacaaacatgaatcggtcgataaacctctgcatccagcgct 122
| ||||||||| || |||||||||||||||||||||||||
Sbjct: 42 a---aaacatgaaccgatcgataaacctctgcatccagcgct 4
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 81.8 bits (41), Expect = 1e-16
Identities = 88/102 (86%), Gaps = 5/102 (4%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttg--tgacacta 80
|||| |||||||||||||||||||||||||||||||||| ||||| ||| | ||| |
Sbjct: 102 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 43
Query: 81 acacaaacatgaatcggtcgataaacctctgcatccagcgct 122
| ||||||||| || |||||||||||||||||||||||||
Sbjct: 42 a---aaacatgaaccgatcgataaacctctgcatccagcgct 4
>51616_ptc-miR162a:pmrd
Length = 107
Score = 81.8 bits (41), Expect = 1e-16
Identities = 88/102 (86%), Gaps = 5/102 (4%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttg--tgacacta 80
|||| |||||||||||||||||||||||||||||||||| ||||| ||| | ||| |
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
Query: 81 acacaaacatgaatcggtcgataaacctctgcatccagcgct 122
| ||||||||| || |||||||||||||||||||||||||
Sbjct: 64 a---aaacatgaaccgatcgataaacctctgcatccagcgct 102
>48545_gma-miR162a:pmrd
Length = 102
Score = 81.8 bits (41), Expect = 1e-16
Identities = 91/106 (85%), Gaps = 5/106 (4%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacacta 80
|||||||||||||| ||||||||||||||||||||||||| | | ||||| || |
Sbjct: 1 gtgaagtcactggatgcagcggttcatcgatctcttcctg----aatcgttgtttaac-a 55
Query: 81 acacaaacatgaatcggtcgataaacctctgcatccagcgctcact 126
|| || ||||||||| |||||||||||||||||||||||||||||
Sbjct: 56 tcagaaccatgaatcgatcgataaacctctgcatccagcgctcact 101
>48707_mtr-miR162d:pmrd
Length = 87
Score = 77.8 bits (39), Expect = 2e-15
Identities = 80/90 (88%), Gaps = 4/90 (4%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac-taacacaaac 88
||||| |||||||||||||||||| |||||| || |||||| || | | ||| ||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctg--aattttgtt-tgtctcgtaaaacaaac 57
Query: 89 atgaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||||
Sbjct: 58 atgaatcggtcgataaacctctgcatccag 87
>48706_mtr-miR162c:pmrd
Length = 86
Score = 75.8 bits (38), Expect = 8e-15
Identities = 79/89 (88%), Gaps = 4/89 (4%)
Strand = Plus / Minus
Query: 30 ctggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac-taacacaaac 88
||||| |||||||||||||||||| |||||| || |||||| || | | ||| ||||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcctg--aattttgtt-tgtctcgtaaaacaaac 30
Query: 89 atgaatcggtcgataaacctctgcatcca 117
|||||||||||||||||||||||||||||
Sbjct: 29 atgaatcggtcgataaacctctgcatcca 1
>48705_mtr-miR162b:pmrd
Length = 85
Score = 73.8 bits (37), Expect = 3e-14
Identities = 78/88 (88%), Gaps = 4/88 (4%)
Strand = Plus / Plus
Query: 31 tggaggcagcggttcatcgatctcttcctgggaaatttgttgtgacac-taacacaaaca 89
|||| |||||||||||||||||| |||||| || |||||| || | | ||| |||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctg--aattttgtt-tgtctcgtaaaacaaaca 57
Query: 90 tgaatcggtcgataaacctctgcatcca 117
||||||||||||||||||||||||||||
Sbjct: 58 tgaatcggtcgataaacctctgcatcca 85
>46937_ath-miR162a:pmrd
Length = 140
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 25 agtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatccagcg 120
||||||| | |||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctg 64
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctg 66
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 103 gaagacactggaggcagcggttcatcgatcttttcctg 66
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 101 gaagacactggaggcagcggttcatcgatcttttcctg 64
>51618_ptc-miR162c:pmrd
Length = 107
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctg 41
>51617_ptc-miR162b:pmrd
Length = 107
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 23 gaagtcactggaggcagcggttcatcgatctcttcctg 60
|||| |||||||||||||||||||||||||| ||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctg 41
>48682_llu-miR162:pmrd
Length = 80
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 79 taacacaaac-atgaatcggtcgataaacctctgcatccag 118
|||||||||| |||||||| |||||||||||||||||||||
Sbjct: 40 taacacaaaccatgaatcgatcgataaacctctgcatccag 80
>48546_gma-miR162m:pmrd
Length = 367
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccagcgctcact 126
|||||||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcact 29
>54948_zma-miR162b:pmrd
Length = 130
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
>48685_lsa-miR162:pmrd
Length = 89
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 98 tcgataaacctctgcatccagcgctcac 125
||||||||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcgctcac 28
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 91 gaatcggtcgataaacctctgcatccagcgct 122
|||||| |||||||||||||||||||||||||
Sbjct: 42 gaatcgatcgataaacctctgcatccagcgct 11
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
|||||||| |||||||||||||||||||||||
Sbjct: 111 gtgaagtcgctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 21 gtgaagtcactggaggcagcggttcatcgatc 52
|||||||| |||||||||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccagcgct 122
|||||| |||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
>48690_mdo-miR162:pmrd
Length = 88
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 88 catgaatcggtcgataaacctctgcatccag 118
||||||||||||||||||||| |||||||||
Sbjct: 58 catgaatcggtcgataaacctttgcatccag 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 30 ctggaggcagcggttcatcgatct 53
||||||||| ||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatct 24
>48834_osa-miR162a:pmrd
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| |||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>48836_osa-miR162m:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| ||||||| |||||||||||||
Sbjct: 87 gaatcgatcgataagcctctgcatccag 114
>48835_osa-miR162b:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 91 gaatcggtcgataaacctctgcatccag 118
|||||| ||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
