miRNEST 2.0, an integrative microRNA resource :: BLAST
>48651_hvu-miR396:pmrd
Length = 107
Score = 99.6 bits (50), Expect = 7e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgtcaacacgcgcgcgccggccagccatg 70
|||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||
Sbjct: 1 gcggccatgctctccacaggctttcttgaactgtcaactcgcgcgcgccagccatccatg 60
Query: 71 gc 72
||
Sbjct: 61 gc 62
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 134 gttgatggttcaagaaagtccttggaaaccatgcccgc 171
|||||||||||||||||||||||||||| |||||||||
Sbjct: 70 gttgatggttcaagaaagtccttggaaaacatgcccgc 107
>48480_far-miR396:pmrd
Length = 99
Score = 87.7 bits (44), Expect = 3e-18
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 6 agatcgcggccatgctctccacaggctttcttgaactgtcaacacgcgcgcg 57
||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 1 agatcgcggccatgctctccacaggctttcttgaactgtgaactcgcgcgcg 52
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 138 atggttcaagaaagtccttggaaaccatgcccgcctct 175
|||||||||||||||||||||||| |||||||||||||
Sbjct: 62 atggttcaagaaagtccttggaaaacatgcccgcctct 99
>48797_oru-miR396:pmrd
Length = 178
Score = 63.9 bits (32), Expect = 4e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 13 ggccatgctctccacaggctttcttgaactgt 44
||||||||||||||||||||||||||||||||
Sbjct: 1 ggccatgctctccacaggctttcttgaactgt 32
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 131 cttgttgatggttcaagaaagtccttggaaaccatg 166
||||||||| ||||||||||||||||||||| ||||
Sbjct: 139 cttgttgatagttcaagaaagtccttggaaaacatg 174
>48954_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 14 gccatgctctccacaggctttcttgaactgt 44
|||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgt 31
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 131 cttgttgatggttcaagaaagtccttggaaaccatg 166
||||||||| ||||||||||||||||||||| ||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatg 173
>48953_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 14 gccatgctctccacaggctttcttgaactgt 44
|||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgt 31
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 131 cttgttgatggttcaagaaagtccttggaaaccatg 166
||||||||| ||||||||||||||||||||| ||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatg 173
>48952_osa-miR396f:pmrd
Length = 176
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 14 gccatgctctccacaggctttcttgaactgt 44
|||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgt 31
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 131 cttgttgatggttcaagaaagtccttggaaaccatg 166
||||||||| ||||||||||||||||||||| ||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatg 173
>48951_osa-miR396e:pmrd
Length = 184
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaaccatgcc 168
||||||||||||||||||| || |||||||||||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatgcc 182
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgt 44
|||| |||||| ||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgt 34
>48950_osa-miR396e:pmrd
Length = 184
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaaccatgcc 168
||||||||||||||||||| || |||||||||||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatgcc 182
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgt 44
|||| |||||| ||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgt 34
>48949_osa-miR396e:pmrd
Length = 184
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaaccatgcc 168
||||||||||||||||||| || |||||||||||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatgcc 182
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgt 44
|||| |||||| ||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgt 34
>48948_osa-miR396d:pmrd
Length = 142
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgt 44
|||| |||||| ||||||||||||||||||||||
Sbjct: 9 gcgggcatgctttccacaggctttcttgaactgt 42
>55085_zma-miR396n:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgt 44
||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgt 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaa 161
||||||||||||||||||| || ||||||
Sbjct: 158 tgttgatggttcaagaaagcccatggaaa 186
>55084_zma-miR396m:pmrd
Length = 227
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgt 44
||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgt 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaa 161
||||||||||||||||||| || ||||||
Sbjct: 199 tgttgatggttcaagaaagcccatggaaa 227
>55076_zma-miR396e:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgt 44
||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgt 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaa 161
||||||||||||||||||| || ||||||
Sbjct: 158 tgttgatggttcaagaaagcccatggaaa 186
>55075_zma-miR396d:pmrd
Length = 186
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgt 44
||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgt 24
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaa 161
||||||||||||||||||| || ||||||
Sbjct: 158 tgttgatggttcaagaaagcccatggaaa 186
>54488_sbi-miR396e:pmrd
Length = 189
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgt 44
||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgt 24
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 133 tgttgatggttcaagaaagtccttggaaac 162
||||||||||||||||||| || |||||||
Sbjct: 160 tgttgatggttcaagaaagcccatggaaac 189
