miRNEST 2.0, an integrative microRNA resource :: BLAST
>54673_tae-miR159a:pmrd
Length = 177
Score = 351 bits (177), Expect = 1e-97
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 9 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 60
Query: 69 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 120
Query: 129 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>48657_hvv-miR159b:pmrd
Length = 174
Score = 289 bits (146), Expect = 4e-79
Identities = 168/174 (96%), Gaps = 1/174 (0%)
Strand = Plus / Plus
Query: 10 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttca 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1 tggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttca 60
Query: 70 tggttcccactatcctatctcca-tagaaaacgaggagagaggcctgtggtttgcatgac 128
||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||
Sbjct: 61 tggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatgat 120
Query: 129 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
>54392_sar-miR159:pmrd
Length = 175
Score = 157 bits (79), Expect = 4e-39
Identities = 153/175 (87%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 10 tggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgctcgttc 68
|||||||||||||||||||||||| ||||| | |||||| | || |||||||||||||
Sbjct: 1 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 60
Query: 69 atggttcccactatcctatctcc-atagaaaacgaggagagaggcctgtggtttgcatga 127
|||||||||||||||||| |||| | |||| | ||||| |||||||||| ||||||||
Sbjct: 61 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 120
Query: 128 ccgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 182
|||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 121 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 175
>48820_osa-miR159b:pmrd
Length = 188
Score = 111 bits (56), Expect = 2e-25
Identities = 153/182 (84%), Gaps = 5/182 (2%)
Strand = Plus / Plus
Query: 9 gtggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttc 68
||||||||||| || |||||||||| ||| || | ||||||| | |||||||| ||||
Sbjct: 10 gtggagctcctttcgttccaatgaaaggtttatctgaagggtga-tacagctgcttgttc 68
Query: 69 atggttcccactatcctatctccatagaaaacgaggagagaggcctgtggtttgcatgac 128
|||||||||||||| ||||||| |||| ||| ||| | |||| |||||||||||||||
Sbjct: 69 atggttcccactattctatctc-ataggaaaagag---ataggcttgtggtttgcatgac 124
Query: 129 cgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcatctt 188
| |||||||| || | ||| ||||||| || |||||||||||||||||||||||||||
Sbjct: 125 caaggagccgaatcaactccttgctgaccactctttggattgaagggagctctgcatctt 184
Query: 189 ga 190
||
Sbjct: 185 ga 186
>54930_zma-miR159a:pmrd
Length = 246
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 11 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 70
|||||||||||||||||||||||||||| | |||||| | || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggtcgttccgaagggctggttccgctgctcgttcat 81
Query: 71 ggttcccactatcctatctc 90
||||||||||||||||||||
Sbjct: 82 ggttcccactatcctatctc 101
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 104 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 163
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 164 tggattgaagggagctctgcatc 186
|||||||||||||||||||||||
Sbjct: 209 tggattgaagggagctctgcatc 231
>54631_sof-miR159d:pmrd
Length = 265
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 70
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 71 ggttcccactatcctatctc 90
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 73.8 bits (37), Expect = 4e-14
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 114 tgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtttggattgaag 173
|||||||||||||||||| |||| || || |||| |||| ||||| ||||||||||||
Sbjct: 178 tgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaag 237
Query: 174 ggagctctgcatc 186
|||||||||||||
Sbjct: 238 ggagctctgcatc 250
>54628_sof-miR159a:pmrd
Length = 265
Score = 87.7 bits (44), Expect = 3e-18
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 70
|||||||||||||||||||||||||| | | |||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtt-gttccgctgctcgttcat 80
Query: 71 ggttcccactatcctatctc 90
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 104 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 163
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 164 tggattgaagggagctctgcatc 186
|||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcatc 250
>54629_sof-miR159b:pmrd
Length = 266
Score = 85.7 bits (43), Expect = 1e-17
Identities = 73/83 (87%)
Strand = Plus / Plus
Query: 104 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 163
|||| |||| ||||||||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 164 tggattgaagggagctctgcatc 186
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 79.8 bits (40), Expect = 7e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 70
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 22 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 80
Query: 71 ggttcccactatcctatctc 90
||||||||||||||||||||
Sbjct: 81 ggttcccactatcctatctc 100
>54931_zma-miR159b:pmrd
Length = 221
Score = 81.8 bits (41), Expect = 2e-16
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 114 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 172
||||||||||||||||||||||| || || |||| || ||||||||||||||||||||
Sbjct: 134 tgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgtttggattgaa 192
Query: 173 gggagctctgcatcttg 189
|||||||||||||||||
Sbjct: 193 gggagctctgcatcttg 209
>54632_sof-miR159e:pmrd
Length = 264
Score = 79.8 bits (40), Expect = 7e-16
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 11 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 70
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 21 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 79
Query: 71 ggttcccactatcctatctc 90
||||||||||||||||||||
Sbjct: 80 ggttcccactatcctatctc 99
Score = 60.0 bits (30), Expect = 6e-10
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 104 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 163
|||| |||| |||||||||||||||||| |||| || || |||| |||| ||||| ||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 164 tggattgaagggagctct 181
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
>54934_zma-miR159e:pmrd
Length = 203
Score = 77.8 bits (39), Expect = 3e-15
Identities = 64/71 (90%), Gaps = 1/71 (1%)
Strand = Plus / Plus
Query: 114 tgtggtttgcatgaccgaggagccgcttcgatccct-cgctgaccgctgtttggattgaa 172
||||||||||||||||||||||| || ||| |||| || ||||||||||||||| ||||
Sbjct: 133 tgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgtttggagtgaa 192
Query: 173 gggagctctgc 183
|||||||||||
Sbjct: 193 gggagctctgc 203
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 56 cagctgctcgttcatggttcccactatcctatctc 90
||||||||||||||||||||||||| ||| |||||
Sbjct: 48 cagctgctcgttcatggttcccactgtcccatctc 82
>51338_pgl-miR159:pmrd
Length = 226
Score = 71.9 bits (36), Expect = 2e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 47 gggtttgtgcagctgctcgttcatggttcccactatcctatctc 90
||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 38 gggttggtacagctgctcgttcatggttcccactatcctatctc 81
Score = 69.9 bits (35), Expect = 7e-13
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 104 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 163
|||| |||| ||||| ||||||||||||||||| || || |||| |||| ||||| ||
Sbjct: 148 gagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 207
Query: 164 tggattgaagggagctctg 182
|||||||||||||||||||
Sbjct: 208 tggattgaagggagctctg 226
>48656_hvv-miR159a:pmrd
Length = 303
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatcttga 190
|||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatcttga 29
>48819_osa-miR159a:pmrd
Length = 272
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatctt 188
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatctt 188
|||||||||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctctgcatctt 268
>54674_tae-miR159b:pmrd
Length = 255
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatct 187
||||||||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctctgcatct 255
>54937_zma-miR159m:pmrd
Length = 457
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatc 186
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatc 186
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>48701_mtr-miR159c:pmrd
Length = 44
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatcttg 189
|||||||||||||||||||| |||||||
Sbjct: 1 tttggattgaagggagctctacatcttg 28
>48728_mtr-miR319b:pmrd
Length = 42
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 163 ttggattgaagggagctctgcatcttg 189
||||||||||||||||||| |||||||
Sbjct: 1 ttggattgaagggagctctacatcttg 27
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 160 tgtttggattgaagggagctct 181
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctgcatct 187
|||||||||||||||||||| |||||
Sbjct: 168 tttggattgaagggagctcttcatct 193
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctctg 182
|||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctctg 249
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>54378_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctct 172
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48539_gma-miR159a:pmrd
Length = 214
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 gtttggattgaagggagctc 180
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 tttggattgaagggagctct 181
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
