miRNEST 2.0, an integrative microRNA resource :: BLAST
>54697_tae-miR1122:pmrd
Length = 295
Score = 127 bits (64), Expect = 3e-30
Identities = 109/124 (87%)
Strand = Plus / Plus
Query: 12 atacttccttcgtcccaaaattcttgttttaaatttgtctaaatacggatgtatcaaatc 71
||||| ||| |||||||||| | ||| ||| ||||||||||||||| ||||||||| ||
Sbjct: 24 atactccctccgtcccaaaaattttggcttagatttgtctaaatacgtatgtatcaagtc 83
Query: 72 acgttttagtattagatacatccgcatctagacgaatctaagataagaattttaggacgt 131
| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||
Sbjct: 84 atgttttagtattagatacatccgtatctagactaatctaagacaagaattttgggacgg 143
Query: 132 aggg 135
||||
Sbjct: 144 aggg 147
Score = 61.9 bits (31), Expect = 1e-10
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 12 atacttccttcgtcccaaaattcttgttttaaatttgtctaaatacggatgtatc 66
||||| ||| ||||||||||||||||| ||| ||| ||||| |||||||||||||
Sbjct: 152 atactccctccgtcccaaaattcttgtcttagattagtctagatacggatgtatc 98
>48647_hpi-miR1122:pmrd
Length = 180
Score = 97.6 bits (49), Expect = 2e-21
Identities = 105/124 (84%)
Strand = Plus / Plus
Query: 12 atacttccttcgtcccaaaattcttgttttaaatttgtctaaatacggatgtatcaaatc 71
||||| ||| ||||||||||||||||| || ||||||||||||||||||||||| | ||
Sbjct: 27 atactccctccgtcccaaaattcttgtcatagatttgtctaaatacggatgtatctagtc 86
Query: 72 acgttttagtattagatacatccgcatctagacgaatctaagataagaattttaggacgt 131
| |||||||| ||||| |||| | ||||| || ||||||||| |||||||| |||||
Sbjct: 87 atgttttagtgttagacacattcatatctaaacaaatctaagacnagaattttgggacgg 146
Query: 132 aggg 135
||||
Sbjct: 147 aggg 150
Score = 48.1 bits (24), Expect = 2e-06
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 84 tagatacatccgcatctagacgaatctaagataagaattttaggacgtaggg 135
|||||||||||| || ||||| |||||| || ||||||||| ||||| ||||
Sbjct: 83 tagatacatccgtatttagacaaatctatgacaagaattttgggacggaggg 32
>54757_tmo-miR1122:pmrd
Length = 180
Score = 95.6 bits (48), Expect = 9e-21
Identities = 96/112 (85%)
Strand = Plus / Plus
Query: 13 tacttccttcgtcccaaaattcttgttttaaatttgtctaaatacggatgtatcaaatca 72
|||| ||| |||||||||||| |||| ||||||||||||||||| |||||||| | | |
Sbjct: 26 tactccctccgtcccaaaattgttgtcttaaatttgtctaaatatggatgtatgtagtta 85
Query: 73 cgttttagtattagatacatccgcatctagacgaatctaagataagaatttt 124
| ||||||| ||||||||||||| ||||| || ||| ||||| |||||||||
Sbjct: 86 cattttagtgttagatacatccgtatctaaacaaatgtaagacaagaatttt 137
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 24 tcccaaaattcttgttttaaatttgtctaaatacggatgtatc 66
||||||||||||||| ||| |||||| || |||||||||||||
Sbjct: 141 tcccaaaattcttgtcttacatttgtttagatacggatgtatc 99
>54762_tur-miR1122:pmrd
Length = 180
Score = 54.0 bits (27), Expect = 3e-08
Identities = 87/107 (81%)
Strand = Plus / Plus
Query: 23 gtcccaaaattcttgttttaaatttgtctaaatacggatgtatcaaatcacgttttagta 82
|||| |||||| ||| ||| ||||||||| ||||| |||||| | |||| |||||||
Sbjct: 36 gtcctaaaatttgtgtcttagatttgtctacatacgaatgtatttattcacattttagtg 95
Query: 83 ttagatacatccgcatctagacgaatctaagataagaattttaggac 129
|||||||||| || || || | ||| ||||||||||||||| ||||
Sbjct: 96 ttagatacattcgtatttaaataaatttaagataagaattttgggac 142
Score = 54.0 bits (27), Expect = 3e-08
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 12 atacttccttcgtcccaaaattcttgttttaaatttgtctaaatacggatgtatc 66
||||||||| |||||||||||||| | |||||||| | |||||||| |||||||
Sbjct: 153 atacttcctctgtcccaaaattcttatcttaaatttatttaaatacgaatgtatc 99
>48320_bdi-miR1122:pmrd
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 42 aaatttgtctaaatacggatgtatc 66
||||||||| |||||||||||||||
Sbjct: 90 aaatttgtccaaatacggatgtatc 66
