miRNEST 2.0, an integrative microRNA resource :: BLAST
>54695_tae-miR1120:pmrd
Length = 119
Score = 85.7 bits (43), Expect = 1e-17
Identities = 75/85 (88%), Gaps = 3/85 (3%)
Strand = Plus / Minus
Query: 54 tacttcctccgtcccataatataagagcgtttttgacactacactagtataaaaaatgct 113
|||| |||||||| |||||||||||| ||||||||||||||||| | ||||||| |
Sbjct: 99 tactccctccgtctcataatataagaatgtttttgacactacactg---tcaaaaatgtt 43
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 42 cttatattatgggacggagggagta 18
Score = 56.0 bits (28), Expect = 1e-08
Identities = 72/86 (83%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 53 gtacttcctccgtcccataatataagagcgtttttgacactacactagtataaaaaatgc 112
||||| ||||||||||||||||||||| | ||||||||| | |||| | |||||
Sbjct: 17 gtactccctccgtcccataatataagaacatttttgacagt---gtagtgtcaaaaacat 73
Query: 113 tcttatattatgggacggagggagta 138
|||||||||||| |||||||||||||
Sbjct: 74 tcttatattatgagacggagggagta 99
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 114 cttatattatgggacggagggagtag 139
||||||||||||||||||||||||||
Sbjct: 34 cttatattatgggacggagggagtag 9
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 89 cttatattatgggacggagggagta 113
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 tacttcctccgtcccataatataag 78
|||| ||||||||||||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 54 tacttcctccgtcccataatataag 78
|||| ||||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataag 89
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 114 cttatattatgggacggagggagtag 139
||||||||||||||||||||||||||
Sbjct: 97 cttatattatgggacggagggagtag 122
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 31 cttatattatgggacggagggagta 7
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 54 tacttcctccgtcccataatataag 78
|||| ||||||||||||||||||||
Sbjct: 7 tactccctccgtcccataatataag 31
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 54 tacttcctccgtcccataatataag 78
|||| ||||||||||||||||||||
Sbjct: 121 tactccctccgtcccataatataag 97
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagggagta 9
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 gtacttcctccgtcccataatataag 78
||||| ||||||||||||||||||||
Sbjct: 8 gtactccctccgtcccataatataag 33
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 33 cttatattatgggacggagggagta 9
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 53 gtacttcctccgtcccataatataag 78
||||| ||||||||||||||||||||
Sbjct: 8 gtactccctccgtcccataatataag 33
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 73 cttatattatgggacggagggagta 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 54 tacttcctccgtcccataatataag 78
|||| ||||||||||||||||||||
Sbjct: 97 tactccctccgtcccataatataag 73
>49070_osa-miR818d:pmrd
Length = 139
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 114 cttatattatgggacggagggagta 138
|||||||||||||||||||||||||
Sbjct: 103 cttatattatgggacggagggagta 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 51 tagtacttcctccgtcccataatataag 78
||||||| ||||||||||||||||||||
Sbjct: 130 tagtactccctccgtcccataatataag 103
>49120_osa-miR1436:pmrd
Length = 161
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 117 atattatgggacggagggagtagc 140
||||||||||||||||||||||||
Sbjct: 33 atattatgggacggagggagtagc 10
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 119 attatgggacggagggagtag 139
|||||||||||||||||||||
Sbjct: 123 attatgggacggagggagtag 143
>49126_osa-miR1442:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 114 cttatattatgggacggagggagtag 139
|||||||||||||||||| |||||||
Sbjct: 141 cttatattatgggacggatggagtag 116
>49068_osa-miR818b:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 112 ctcttatattatgggacggagg 133
||||||||||||||||||||||
Sbjct: 22 ctcttatattatgggacggagg 1
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 59 cctccgtcccataatataagag 80
||||||||||||||||||||||
Sbjct: 1 cctccgtcccataatataagag 22
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 59 cctccgtcccataatataag 78
||||||||||||||||||||
Sbjct: 113 cctccgtcccataatataag 94
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 114 cttatattatgggacggagg 133
||||||||||||||||||||
Sbjct: 94 cttatattatgggacggagg 113
