miRNEST 2.0, an integrative microRNA resource :: BLAST
>54404_sbi-miR160a:pmrd
Length = 84
Score = 103 bits (52), Expect = 3e-23
Identities = 77/84 (91%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaaccca-agaatgtggttgcctgctgt 80
||||||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccatatgctaaggttgcctgctgt 60
Query: 81 gggtggcgtgcaaggtgccaagca 104
||||||||||||||| ||||||||
Sbjct: 61 gggtggcgtgcaaggggccaagca 84
>54938_zma-miR160a:pmrd
Length = 104
Score = 97.6 bits (49), Expect = 2e-21
Identities = 83/92 (90%), Gaps = 3/92 (3%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccacacatgtagc--ccaaccca-agaatgtggttgcctgc 77
|||||||||||||||||||||||||||||||| |||||||| | | ||||||||||
Sbjct: 9 gtgcctggctccctgtatgccacacatgtagcgcccaacccagatgytaaggttgcctgc 68
Query: 78 tgtgggtggcgtgcaaggtgccaagcatgcat 109
|||||||||||||||||| |||||||||||||
Sbjct: 69 tgtgggtggcgtgcaaggggccaagcatgcat 100
>48827_osa-miR160b:pmrd
Length = 139
Score = 93.7 bits (47), Expect = 3e-20
Identities = 78/87 (89%), Gaps = 1/87 (1%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgt 80
||||||||||||||||||||||| |||||||||||| ||| | |||| ||| ||||||
Sbjct: 29 gtgcctggctccctgtatgccactcatgtagcccaatccatg-gtgtgtttggatgctgt 87
Query: 81 gggtggcgtgcaaggtgccaagcatgc 107
||||||||||||||| |||||||||||
Sbjct: 88 gggtggcgtgcaaggagccaagcatgc 114
>54945_zma-miR160h:pmrd
Length = 86
Score = 87.7 bits (44), Expect = 2e-18
Identities = 79/88 (89%), Gaps = 7/88 (7%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagc--ccaacccaagaatgt---ggttgcctg 76
||||||||||||||||||||||||||||||| |||||||| |||| |||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcgcccaacccag--atgttaaggttgcctg 58
Query: 77 ctgtgggtggcgtgcaaggtgccaagca 104
||||||||||||||||||| ||||||||
Sbjct: 59 ctgtgggtggcgtgcaaggggccaagca 86
>54944_zma-miR160g:pmrd
Length = 86
Score = 85.7 bits (43), Expect = 7e-18
Identities = 77/86 (89%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagc--ccaaccca-agaatgtggttgcctgct 78
||||||||||||||||||||||||||||||| |||||||| | | |||||||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcgcccaacccagatgctaaggttgcctgct 60
Query: 79 gtgggtggcgtgcaaggtgccaagca 104
||||||||||||||||| ||||||||
Sbjct: 61 gtgggtggcgtgcaaggggccaagca 86
>54939_zma-miR160b:pmrd
Length = 121
Score = 85.7 bits (43), Expect = 7e-18
Identities = 81/91 (89%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctg 79
|||||||||||||||||||||||||||||||| ||||||| | ||| ||| |||||
Sbjct: 19 tgtgcctggctccctgtatgccacacatgtag-ccaacccgtg-gcgtgattggatgctg 76
Query: 80 tgggtggcgtgcaaggtgccaagcatgcata 110
|||||||||||||||| ||||||||||||||
Sbjct: 77 tgggtggcgtgcaaggagccaagcatgcata 107
>54405_sbi-miR160b:pmrd
Length = 82
Score = 85.7 bits (43), Expect = 7e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 81
|||||||||||||||||||||||||||||||||||||| | ||| ||| |||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtagcccaacccgtg-gcgtgattggatgctgtg 59
Query: 82 ggtggcgtgcaaggtgccaagca 104
|||||||||||||| ||||||||
Sbjct: 60 ggtggcgtgcaaggagccaagca 82
>48832_osa-miR160m:pmrd
Length = 82
Score = 85.7 bits (43), Expect = 7e-18
Identities = 74/83 (89%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 81
|||||||||||||||||||||| |||||||||||| ||| | |||| ||| |||||||
Sbjct: 1 tgcctggctccctgtatgccactcatgtagcccaatccatg-gtgtgtttggatgctgtg 59
Query: 82 ggtggcgtgcaaggtgccaagca 104
|||||||||||||| ||||||||
Sbjct: 60 ggtggcgtgcaaggagccaagca 82
>48826_osa-miR160a:pmrd
Length = 88
Score = 83.8 bits (42), Expect = 3e-17
Identities = 79/89 (88%), Gaps = 3/89 (3%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccacacatgtagcccaaccca-agaatgtggttgcctgct 78
|||||||||||||||||||||||||||||||| |||||||| | | ||||||||| |
Sbjct: 2 tgtgcctggctccctgtatgccacacatgtagaccaacccatggtgtctggttgcctac- 60
Query: 79 gtgggtggcgtgcaaggtgccaagcatgc 107
|||||||||||||||| |||||||||||
Sbjct: 61 -tgggtggcgtgcaaggagccaagcatgc 88
>54947_zma-miR160m:pmrd
Length = 81
Score = 69.9 bits (35), Expect = 4e-13
Identities = 73/83 (87%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccacacatgtagcccaacccaagaatgtggttgcctgctgtg 81
|||||||||||||||||||||||||||||| ||||||| | ||| ||| |||||||
Sbjct: 1 tgcctggctccctgtatgccacacatgtag-ccaacccgtg-gcgtgattggatgctgtg 58
Query: 82 ggtggcgtgcaaggtgccaagca 104
|||||||||||||| ||||||||
Sbjct: 59 ggtggcgtgcaaggagccaagca 81
>54780_vvi-miR160c:pmrd
Length = 106
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccacac 45
||||||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgccacac 34
>54940_zma-miR160c:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>48828_osa-miR160c:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 5 tgtgcctggctccctgtatgccac 28
>48791_oba-miR160:pmrd
Length = 90
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgccac 43
||||||||||||||||||||||||
Sbjct: 2 tgtgcctggctccctgtatgccac 25
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccaca 44
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>46935_ath-miR160b:pmrd
Length = 89
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 21 gtgcctggctccctgtatgccaca 44
||||||||||||||||||||||||
Sbjct: 4 gtgcctggctccctgtatgccaca 27
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgccaca 34
>51611_ptc-miR160d:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
>51610_ptc-miR160c:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>51609_ptc-miR160b:pmrd
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 9 tgtgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccaca 33
>51334_pga-miR160:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccaca 44
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccaca 23
>48704_mtr-miR160e:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48703_mtr-miR160d:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48702_mtr-miR160b:pmrd
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 4 tgtgcctggctccctgtatgcca 26
>48542_gma-miR160a:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tgtgcctggctccctgtatgcca 42
|||||||||||||||||||||||
Sbjct: 19 tgtgcctggctccctgtatgcca 41
>54946_zma-miR160i:pmrd
Length = 81
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgccac 23
>54942_zma-miR160e:pmrd
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgccac 30
>54941_zma-miR160d:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccac 42
>54759_ttu-miR160a:pmrd
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54675_tae-miR160:pmrd
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgccac 43
>54575_smo-miR160b:pmrd
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgccac 34
>54408_sbi-miR160e:pmrd
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54407_sbi-miR160d:pmrd
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>54406_sbi-miR160c:pmrd
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>51364_ppt-miR160f:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51363_ppt-miR160e:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgccac 51
>51359_ppt-miR160a:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccac 32
>48833_osa-miR160n:pmrd
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccac 22
>48829_osa-miR160d:pmrd
Length = 142
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgccac 29
>46936_ath-miR160c:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgccac 43
||||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgccac 26
>54783_vvi-miR160f:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54781_vvi-miR160d:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54574_smo-miR160a:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54541_sly-miR160a:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgcca 40
>51367_ppt-miR160i:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 gcctggctccctgtatgccac 43
|||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgccac 51
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>48397_bra-miR160a:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>48396_bra-miR160a:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 26 tgcctggctccctgtatgcca 46
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46934_ath-miR160a:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>46865_aqc-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgcctggctccctgtatgcca 42
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
