miRNEST 2.0, an integrative microRNA resource :: BLAST
>48480_far-miR396:pmrd
Length = 99
Score = 113 bits (57), Expect = 4e-26
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 6 agatcgcggccatgctctccacaggctttcttgaactgtgaactcgcgcgcgtgcgc 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatcgcggccatgctctccacaggctttcttgaactgtgaactcgcgcgcgtgcgc 57
Score = 83.8 bits (42), Expect = 3e-17
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 106 gttcatggttcaagaaagtccttggaaaacatgcccgcctct 147
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 gttcatggttcaagaaagtccttggaaaacatgcccgcctct 99
>48651_hvu-miR396:pmrd
Length = 107
Score = 85.7 bits (43), Expect = 9e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgtgaactcgcgcgcg 57
|||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gcggccatgctctccacaggctttcttgaactgtcaactcgcgcgcg 47
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 110 atggttcaagaaagtccttggaaaacatgcccgc 143
||||||||||||||||||||||||||||||||||
Sbjct: 74 atggttcaagaaagtccttggaaaacatgcccgc 107
>48797_oru-miR396:pmrd
Length = 178
Score = 77.8 bits (39), Expect = 2e-15
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 13 ggccatgctctccacaggctttcttgaactgtgaactcg 51
|||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggccatgctctccacaggctttcttgaactgtgaactcg 39
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 103 cttgttcatggttcaagaaagtccttggaaaacatg 138
|||||| || ||||||||||||||||||||||||||
Sbjct: 139 cttgttgatagttcaagaaagtccttggaaaacatg 174
>48954_osa-miR396f:pmrd
Length = 176
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 14 gccatgctctccacaggctttcttgaactgtgaactcg 51
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 103 cttgttcatggttcaagaaagtccttggaaaacatg 138
|||||| || ||||||||||||||||||||||||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatg 173
>48953_osa-miR396f:pmrd
Length = 176
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 14 gccatgctctccacaggctttcttgaactgtgaactcg 51
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 103 cttgttcatggttcaagaaagtccttggaaaacatg 138
|||||| || ||||||||||||||||||||||||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatg 173
>48952_osa-miR396f:pmrd
Length = 176
Score = 75.8 bits (38), Expect = 8e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 14 gccatgctctccacaggctttcttgaactgtgaactcg 51
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gccatgctctccacaggctttcttgaactgtgaactcg 38
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 103 cttgttcatggttcaagaaagtccttggaaaacatg 138
|||||| || ||||||||||||||||||||||||||
Sbjct: 138 cttgttgatagttcaagaaagtccttggaaaacatg 173
>48951_osa-miR396e:pmrd
Length = 184
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgtgaactcg 51
|||| |||||| |||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 105 tgttcatggttcaagaaagtccttggaaaacatgcc 140
|||| |||||||||||||| || |||||| ||||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatgcc 182
>48950_osa-miR396e:pmrd
Length = 184
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgtgaactcg 51
|||| |||||| |||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 105 tgttcatggttcaagaaagtccttggaaaacatgcc 140
|||| |||||||||||||| || |||||| ||||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatgcc 182
>48949_osa-miR396e:pmrd
Length = 184
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgtgaactcg 51
|||| |||||| |||||||||||||||||||||||||||||
Sbjct: 1 gcgggcatgctttccacaggctttcttgaactgtgaactcg 41
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 105 tgttcatggttcaagaaagtccttggaaaacatgcc 140
|||| |||||||||||||| || |||||| ||||||
Sbjct: 147 tgttgatggttcaagaaagcccatggaaaccatgcc 182
>48948_osa-miR396d:pmrd
Length = 142
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gcggccatgctctccacaggctttcttgaactgtgaactcg 51
|||| |||||| |||||||||||||||||||||||||||||
Sbjct: 9 gcgggcatgctttccacaggctttcttgaactgtgaactcg 49
>55085_zma-miR396n:pmrd
Length = 186
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtgaactcg 51
|||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
>55084_zma-miR396m:pmrd
Length = 227
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtgaactcg 51
|||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
>55076_zma-miR396e:pmrd
Length = 186
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtgaactcg 51
|||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
>55075_zma-miR396d:pmrd
Length = 186
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtgaactcg 51
|||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
>54488_sbi-miR396e:pmrd
Length = 189
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 23 tccacaggctttcttgaactgtgaactcg 51
|||||||||||||||||||||||||||||
Sbjct: 3 tccacaggctttcttgaactgtgaactcg 31
