miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>48414_bsy-miR1122:pmrd
          Length = 181

 Score = 65.9 bits (33), Expect = 7e-12
 Identities = 51/57 (89%)
 Strand = Plus / Plus

                                                                    
Query: 40  tttgtcaaaatttggatgtatctagctactagttagtgtctagatgcattcaaattt 96
           |||||||||||||||||||||||||  |  | ||||||| |||||||||||||||||
Sbjct: 58  tttgtcaaaatttggatgtatctagacatgacttagtgtatagatgcattcaaattt 114



 Score = 58.0 bits (29), Expect = 2e-09
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                       
Query: 76  tgtctagatgcattcaaattttgacaaacttccgacatgtttcatgggacggagggagta 135
           ||||||||| ||| |||||||||||||||||  ||||| |||  | ||||||||||||||
Sbjct: 85  tgtctagatacatccaaattttgacaaacttgagacatcttttgttggacggagggagta 26

            
Query: 136 c 136
           |
Sbjct: 25  c 25




>50397_osa-miRf11182-akr:pmrd
          Length = 80

 Score = 46.1 bits (23), Expect = 7e-06
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 115 tttcatgggacggagggagtact 137
           |||||||||||||||||||||||
Sbjct: 31  tttcatgggacggagggagtact 9




>50275_osa-miRf11060-akr:pmrd
          Length = 166

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 117 tcatgggacggagggagtacta 138
           ||||||||||||||||||||||
Sbjct: 13  tcatgggacggagggagtacta 34




>50274_osa-miRf11059-akr:pmrd
          Length = 172

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 117 tcatgggacggagggagtacta 138
           ||||||||||||||||||||||
Sbjct: 16  tcatgggacggagggagtacta 37




>49070_osa-miR818d:pmrd
          Length = 139

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 atgggacggagggagtacta 138
           ||||||||||||||||||||
Sbjct: 111 atgggacggagggagtacta 130