miRNEST 2.0, an integrative microRNA resource :: BLAST
>54392_sar-miR159:pmrd
Length = 175
Score = 339 bits (171), Expect = 6e-94
Identities = 174/175 (99%)
Strand = Plus / Plus
Query: 30 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 60
Query: 90 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 120
Query: 150 ccgaggagctgcatcgtcccctcgctggccgctctttggattgaagggagctctg 204
||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgaggagccgcatcgtcccctcgctggccgctctttggattgaagggagctctg 175
>54673_tae-miR159a:pmrd
Length = 177
Score = 157 bits (79), Expect = 5e-39
Identities = 156/179 (87%), Gaps = 2/179 (1%)
Strand = Plus / Plus
Query: 29 gtggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgtt 88
||||||||||||||||||||||||| ||||| | |||||| | || ||||||||||||
Sbjct: 1 gtggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgctcgtt 59
Query: 89 catggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatg 148
||||||||||||||||||| |||| | |||| | ||||| |||||||||| |||||||
Sbjct: 60 catggttcccactatcctatctcc-atagaaaacgaggagagaggcctgtggtttgcatg 118
Query: 149 accgaggagctgcatcgtcccctcgctggccgctctttggattgaagggagctctgcat 207
|||||||||| || ||| ||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 119 accgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctgcat 177
>48657_hvv-miR159b:pmrd
Length = 174
Score = 141 bits (71), Expect = 3e-34
Identities = 150/175 (85%), Gaps = 1/175 (0%)
Strand = Plus / Plus
Query: 30 tggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttc 89
|||||||||||||||||||||||| ||||| | |||||| | || |||||||| ||||
Sbjct: 1 tggagctcctatcattccaatgaagggtctaccg-gaagggtttgtgcagctgcttgttc 59
Query: 90 atggttcccactatcctacctccgtttgaaaccagggagataggcctgtggcttgcatga 149
|||||||||||||||||| |||| || ||| | |||||||||| ||||| ||||||||
Sbjct: 60 atggttcccactatcctatctccattagaacacgaggagataggcttgtggtttgcatga 119
Query: 150 ccgaggagctgcatcgtcccctcgctggccgctctttggattgaagggagctctg 204
|||||||| || ||| ||||||||| ||||| |||||||||||||||||||||
Sbjct: 120 tcgaggagccgcttcgatccctcgctgaccgctgtttggattgaagggagctctg 174
>54629_sof-miR159b:pmrd
Length = 266
Score = 133 bits (67), Expect = 7e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctt 185
||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 169 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 228
Query: 186 tggattgaagggagctctgcatc 208
|||||||||||||||||||||||
Sbjct: 229 tggattgaagggagctctgcatc 251
Score = 75.8 bits (38), Expect = 1e-14
Identities = 79/90 (87%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 18 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctagaaggggtggtac 77
|||| ||||| | ||||||||||||||||||||||| || | | || ||| ||||||| |
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggccgttct-gaa-gggtggttc 66
Query: 78 agctgctcgttcatggttcccactatccta 107
|||||||||||||||||||||||||||||
Sbjct: 67 cgctgctcgttcatggttcccactatccta 96
>54628_sof-miR159a:pmrd
Length = 265
Score = 133 bits (67), Expect = 7e-32
Identities = 79/83 (95%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctt 185
||||||||| ||||| ||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 168 gagataggcttgtggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 227
Query: 186 tggattgaagggagctctgcatc 208
|||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcatc 250
Score = 67.9 bits (34), Expect = 3e-12
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 18 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctagaaggggtggtac 77
|||| ||||| | ||||||||||||||||||||||| || | | || |||||| || | |
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggccgttct-gaagggttgttcc 67
Query: 78 agctgctcgttcatggttcccactatccta 107
|||||||||||||||||||||||||||||
Sbjct: 68 -gctgctcgttcatggttcccactatccta 96
>51338_pgl-miR159:pmrd
Length = 226
Score = 133 bits (67), Expect = 7e-32
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctt 185
||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 148 gagataggcttgtggcttgcatgaccgaggagctgcaccgtccccttgctggccgctctt 207
Query: 186 tggattgaagggagctctg 204
|||||||||||||||||||
Sbjct: 208 tggattgaagggagctctg 226
Score = 81.8 bits (41), Expect = 2e-16
Identities = 69/77 (89%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 31 ggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacagctgctcgttca 90
||||||||||||||||||||||||||| | | | ||| |||||||||||||||||||
Sbjct: 2 ggagctcctatcattccaatgaaaggttgtttttgt-gggttggtacagctgctcgttca 60
Query: 91 tggttcccactatccta 107
|||||||||||||||||
Sbjct: 61 tggttcccactatccta 77
>54930_zma-miR159a:pmrd
Length = 246
Score = 125 bits (63), Expect = 2e-29
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctt 185
||||||||| ||||| ||||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 149 gagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctggccgctctt 208
Query: 186 tggattgaagggagctctgcatc 208
|||||||||||||||||||||||
Sbjct: 209 tggattgaagggagctctgcatc 231
Score = 85.7 bits (43), Expect = 1e-17
Identities = 80/91 (87%), Gaps = 1/91 (1%)
Strand = Plus / Plus
Query: 17 tttggttttgaggtggagctcctatcattccaatgaaaggtcttgctagaaggggtggta 76
||||| ||||| | ||||||||||||||||||||||| |||| | | |||||| ||||
Sbjct: 8 tttgggtttgaagcggagctcctatcattccaatgaagggtcgttcc-gaagggctggtt 66
Query: 77 cagctgctcgttcatggttcccactatccta 107
| |||||||||||||||||||||||||||||
Sbjct: 67 ccgctgctcgttcatggttcccactatccta 97
>54631_sof-miR159d:pmrd
Length = 265
Score = 117 bits (59), Expect = 4e-27
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctt 185
|||||| || ||||| |||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 168 gagatacgcttgtggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctt 227
Query: 186 tggattgaagggagctctgcatc 208
|||||||||||||||||||||||
Sbjct: 228 tggattgaagggagctctgcatc 250
Score = 67.9 bits (34), Expect = 3e-12
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 18 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctagaaggggtggtac 77
|||| ||||| | ||||||||||||||||||||||| || | | || |||||| || | |
Sbjct: 9 ttggatttgaagcggagctcctatcattccaatgaagggccgttct-gaagggttgttcc 67
Query: 78 agctgctcgttcatggttcccactatccta 107
|||||||||||||||||||||||||||||
Sbjct: 68 -gctgctcgttcatggttcccactatccta 96
>54632_sof-miR159e:pmrd
Length = 264
Score = 107 bits (54), Expect = 4e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctt 185
||||||||| ||||| |||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 167 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 226
Query: 186 tggattgaagggagctct 203
||||||||| ||||||||
Sbjct: 227 tggattgaaaggagctct 244
Score = 75.8 bits (38), Expect = 1e-14
Identities = 79/90 (87%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 18 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctagaaggggtggtac 77
|||| ||||| | ||||||||||||||||||||||| || | | || ||| ||||||| |
Sbjct: 8 ttggatttgaagcggagctcctatcattccaatgaagggccgttct-gaa-gggtggttc 65
Query: 78 agctgctcgttcatggttcccactatccta 107
|||||||||||||||||||||||||||||
Sbjct: 66 cgctgctcgttcatggttcccactatccta 95
>54931_zma-miR159b:pmrd
Length = 221
Score = 89.7 bits (45), Expect = 9e-19
Identities = 77/85 (90%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccct-cgctggccgctct 184
||||| ||| ||||| ||||||||||||||||||||| |||||||| || || ||||| |
Sbjct: 124 gagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgctgt 182
Query: 185 ttggattgaagggagctctgcatct 209
|||||||||||||||||||||||||
Sbjct: 183 ttggattgaagggagctctgcatct 207
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 69 gggtggtacagctgctcgttcatggttcccact 101
|||||||||||||||||||||||||||||||||
Sbjct: 58 gggtggtacagctgctcgttcatggttcccact 90
>48820_osa-miR159b:pmrd
Length = 188
Score = 89.7 bits (45), Expect = 9e-19
Identities = 157/190 (82%), Gaps = 7/190 (3%)
Strand = Plus / Plus
Query: 20 ggttttgaggtggagctcctatcattccaatgaaaggtcttgctagaaggggtggtacag 79
|||| ||| ||||||||||| || |||||||||||||| | || |||||| || |||||
Sbjct: 1 ggttatgaagtggagctcctttcgttccaatgaaaggtttatct-gaaggg-tgatacag 58
Query: 80 ctgctcgttcatggttcccactatcctacctccgtttgaaaccagggagataggcctgtg 139
||||| |||||||||||||||||| ||| ||| | |||| ||||||||| ||||
Sbjct: 59 ctgcttgttcatggttcccactattctatctca-taggaaaa----gagataggcttgtg 113
Query: 140 gcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctttggattgaagggag 199
| |||||||||| |||||| | ||| | ||| |||| || |||||||||||||||||||
Sbjct: 114 gtttgcatgaccaaggagccgaatcaactccttgctgaccactctttggattgaagggag 173
Query: 200 ctctgcatct 209
||||||||||
Sbjct: 174 ctctgcatct 183
>54934_zma-miR159e:pmrd
Length = 203
Score = 81.8 bits (41), Expect = 2e-16
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 126 gagataggcctgtggcttgcatgaccgaggagctgcatcgtcccc-tcgctggccgctct 184
||||| ||| ||||| |||||||||||||||||||| |||||||| ||| || ||||| |
Sbjct: 123 gagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgctgt 182
Query: 185 ttggattgaagggagctctgc 205
||||| |||||||||||||||
Sbjct: 183 ttggagtgaagggagctctgc 203
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 69 gggtggtacagctgctcgttcatggttcccact 101
|||||||||||||||||||||||||||||||||
Sbjct: 40 gggtggtacagctgctcgttcatggttcccact 72
>54674_tae-miR159b:pmrd
Length = 255
Score = 60.0 bits (30), Expect = 8e-10
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 128 gataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctttg 187
||||||| | ||||||||||| || |||||||||||| ||| | ||| | |||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcatcaaccctaca-tggaccctctttg 233
Query: 188 gattgaagggagctctgcatct 209
||||||||||||||||||||||
Sbjct: 234 gattgaagggagctctgcatct 255
>48819_osa-miR159a:pmrd
Length = 272
Score = 60.0 bits (30), Expect = 8e-10
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 128 gataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctttg 187
||||||| | ||||||||||| || |||||||||||| ||| | ||| | |||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcatcaaccctaca-tggaccctctttg 245
Query: 188 gattgaagggagctctgcatct 209
||||||||||||||||||||||
Sbjct: 246 gattgaagggagctctgcatct 267
>48796_oru-miR159:pmrd
Length = 274
Score = 60.0 bits (30), Expect = 8e-10
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 128 gataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctttg 187
||||||| | ||||||||||| || |||||||||||| ||| | ||| | |||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcatcaaccctaca-tggaccctctttg 245
Query: 188 gattgaagggagctctgcatct 209
||||||||||||||||||||||
Sbjct: 246 gattgaagggagctctgcatct 267
>48656_hvv-miR159a:pmrd
Length = 303
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctctgcatct 209
||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatct 26
>54937_zma-miR159m:pmrd
Length = 457
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctctgcatc 208
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctctgcatc 208
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>48825_osa-miR159m:pmrd
Length = 249
Score = 50.1 bits (25), Expect = 8e-07
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 128 gataggcctgtggcttgcatgaccgaggagctgcatcgtcccctcgctggccgctctttg 187
||||||| | ||||||||||| || |||||||||||| ||| | ||| | |||||||
Sbjct: 174 gataggcttatggcttgcatgccccaggagctgcatcaaccctaca-tggaccctctttg 232
Query: 188 gattgaagggagctctg 204
|||||||||||||||||
Sbjct: 233 gattgaagggagctctg 249
>46932_ath-miR159b:pmrd
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctctgcatct 209
|||||||||||||||||||||| |||||
Sbjct: 166 tctttggattgaagggagctcttcatct 193
>54378_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 151 tctttggattgaagggagctct 172
>48701_mtr-miR159c:pmrd
Length = 44
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctctgcatct 209
|||||||||||||||||||| |||||
Sbjct: 1 tttggattgaagggagctctacatct 26
>48699_mtr-miR159a:pmrd
Length = 168
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 146 tctttggattgaagggagctct 167
>48539_gma-miR159a:pmrd
Length = 214
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 173 tctttggattgaagggagctct 194
>48395_bra-miR159a:pmrd
Length = 185
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 159 tctttggattgaagggagctct 180
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 182 tctttggattgaagggagctct 203
||||||||||||||||||||||
Sbjct: 161 tctttggattgaagggagctct 182
>48728_mtr-miR319b:pmrd
Length = 42
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 185 ttggattgaagggagctctgcatct 209
||||||||||||||||||| |||||
Sbjct: 1 ttggattgaagggagctctacatct 25
>54777_vvi-miR159c:pmrd
Length = 190
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctct 176
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 184 tttggattgaagggagctct 203
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
