miRNEST 2.0, an integrative microRNA resource :: BLAST
>51603_ptc-miR159b:pmrd
Length = 187
Score = 95.6 bits (48), Expect = 1e-20
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 14 ttatggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctg 73
|||||||||||||||||||||||||||||||||| | |||| ||| ||| |||||||||
Sbjct: 3 ttatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctg 62
Query: 74 agctatgaattccaca 89
|||||||||| |||||
Sbjct: 63 agctatgaatcccaca 78
>54777_vvi-miR159c:pmrd
Length = 190
Score = 75.8 bits (38), Expect = 1e-14
Identities = 72/82 (87%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcattacctgag-ttgcatcatgttttg 175
||||||||||||||||||||| |||||||||||||||| | || || ||| | ||||
Sbjct: 104 gataggcttgtggcttgcatatctcaggagctgcattatccaagtttagatccttgtttg 163
Query: 176 gattgaagggagctctacacct 197
||||||||||||||||||||||
Sbjct: 164 gattgaagggagctctacacct 185
Score = 67.9 bits (34), Expect = 3e-12
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 17 tggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctga 74
||||||||||||||||||||||||||||| | | || || ||| ||||||||||||||
Sbjct: 4 tggagtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctga 61
>54378_pvu-miR159:pmrd
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 80
|||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aattccacacttcta 95
|| ||||| |||||
Sbjct: 61 gatcccacagttcta 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctac 193
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 21 gtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagctatg 80
|||||||||||||||||||||| || ||| || || ||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 81 aattccacacttcta 95
|| ||||| |||||
Sbjct: 61 gatcccacagttcta 75
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctac 193
||||||||||||||||||||||
Sbjct: 153 tttggattgaagggagctctac 174
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 69.9 bits (35), Expect = 7e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagct 77
|||||||||||||||||||||||||||| | | ||||| ||| |||| ||||||| ||||
Sbjct: 2 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 61
Query: 78 atg 80
|||
Sbjct: 62 atg 64
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 ttttggattgaagggagctcta 192
||||||||||||||||||||||
Sbjct: 148 ttttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagct 77
|||||||||||||||||||||||||||| | | ||||| ||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 78 atg 80
|||
Sbjct: 67 atg 69
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 ttttggattgaagggagctcta 192
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 69.9 bits (35), Expect = 7e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 18 ggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctgagct 77
|||||||||||||||||||||||||||| | | ||||| ||| |||| ||||||| ||||
Sbjct: 7 ggagtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagct 66
Query: 78 atg 80
|||
Sbjct: 67 atg 69
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 ttttggattgaagggagctcta 192
||||||||||||||||||||||
Sbjct: 153 ttttggattgaagggagctcta 174
>48539_gma-miR159a:pmrd
Length = 214
Score = 67.9 bits (34), Expect = 3e-12
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 14 ttatggagtggagctccttgaagtccaatagaagatgttgctaggttgattgagctgctg 73
||||| ||||||||||||||||||||||| || ||| || || ||| |||||||||||
Sbjct: 13 ttatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgctt 72
Query: 74 agctatgaattccacacttcta 95
||||||| || ||||| |||||
Sbjct: 73 agctatggatcccacagttcta 94
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacacc 196
|||||||||||||||||||||||||
Sbjct: 175 tttggattgaagggagctctacacc 199
>48824_osa-miR159f:pmrd
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 173 ttggattgaagggagctctacacct 197
|||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacct 183
>48686_ltu-miR159:pmrd
Length = 345
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacacc 196
|||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacacc 25
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 175 gataggcttatggcttgcatgccccaggagctgcat 210
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54540_sly-miR159:pmrd
Length = 177
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 165 atcatgttttggattgaagggagctcta 192
||||| ||||||||||||||||||||||
Sbjct: 150 atcattttttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tggagctccttgaagtccaa 41
||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaa 20
>48825_osa-miR159m:pmrd
Length = 249
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 174 gataggcttatggcttgcatgccccaggagctgcat 209
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
>48819_osa-miR159a:pmrd
Length = 272
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 117 gataggcttgtggcttgcatacctcaggagctgcat 152
||||||||| |||||||||| || ||||||||||||
Sbjct: 187 gataggcttatggcttgcatgccccaggagctgcat 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48701_mtr-miR159c:pmrd
Length = 44
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacaccttg 199
||||||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctacatcttg 28
>48728_mtr-miR319b:pmrd
Length = 42
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 173 ttggattgaagggagctctacaccttg 199
|||||||||||||||||||||| ||||
Sbjct: 1 ttggattgaagggagctctacatcttg 27
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctaca 194
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctaca 194
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctac 193
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>54931_zma-miR159b:pmrd
Length = 221
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctctacaccttgg 200
|||||||||||||||||||| || |||||
Sbjct: 182 tttggattgaagggagctctgcatcttgg 210
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctcta 192
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54673_tae-miR159a:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 tttggattgaagggagctct 191
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
