miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51404_ppt-miR477f:pmrd
Length = 127
Score = 244 bits (123), Expect = 1e-65
Identities = 123/123 (100%)
Strand = Plus / Plus
Query: 1 gtttgtttttctccctcaaaggcttccaacaacaggagggtacaattccattgtggttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtttgtttttctccctcaaaggcttccaacaacaggagggtacaattccattgtggttat 62
Query: 61 aacccatagttgaggtgtttttgctctctctgctgtcggaagccttcgagggagatgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aacccatagttgaggtgtttttgctctctctgctgtcggaagccttcgagggagatgaaa 122
Query: 121 gaa 123
|||
Sbjct: 123 gaa 125
>51405_ppt-miR477h:pmrd
Length = 155
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 gtttgtttttctccctcaaaggcttccaac 30
||||||||||||||||||||||||||||||
Sbjct: 22 gtttgtttttctccctcaaaggcttccaac 51
>51402_ppt-miR477d:pmrd
Length = 154
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 tctccctcaaaggcttccaacaacagg 36
|||||||||||||||||||||||||||
Sbjct: 32 tctccctcaaaggcttccaacaacagg 58
>51403_ppt-miR477e:pmrd
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tctccctcaaaggcttccaacaacagg 36
|||||||||||||||||||||| ||||
Sbjct: 35 tctccctcaaaggcttccaacatcagg 61
>51400_ppt-miR477b:pmrd
Length = 170
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 tctccctcaaaggcttccaaca 31
||||||||||||||||||||||
Sbjct: 35 tctccctcaaaggcttccaaca 56
>51401_ppt-miR477c:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tctccctcaaaggcttccaac 30
|||||||||||||||||||||
Sbjct: 13 tctccctcaaaggcttccaac 33
>54893_vvi-miR477:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tctccctcaaaggcttccaa 29
||||||||||||||||||||
Sbjct: 12 tctccctcaaaggcttccaa 31
