miRNEST 2.0, an integrative microRNA resource :: BLAST
>51347_ppe-miR408:pmrd
Length = 105
Score = 127 bits (64), Expect = 3e-30
Identities = 85/92 (92%)
Strand = Plus / Plus
Query: 49 ataagacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgt 108
|||||||||||| ||||||||||||||||||||||||||||||| | | |||||||||
Sbjct: 5 ataagacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgt 64
Query: 109 ggctccactcatgcactgcctcttccctggct 140
||||| ||||||||||||||||||||||||||
Sbjct: 65 ggctctactcatgcactgcctcttccctggct 96
>54892_vvi-miR408:pmrd
Length = 107
Score = 58.0 bits (29), Expect = 3e-09
Identities = 77/92 (83%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 51 aagacagggacgaggtagagcatggatggagttcccaacagaaca--gtcaagctgttgt 108
||||| |||||||||||| ||||||||||| | ||||||| | || |||||||| |
Sbjct: 7 aagacggggacgaggtagtgcatggatggaactattaacagaagaatgttaagctgtttt 66
Query: 109 ggctccactcatgcactgcctcttccctggct 140
|||| || |||||||||||||||||||||||
Sbjct: 67 tgctctacccatgcactgcctcttccctggct 98
>51762_ptc-miR408:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 103 tgttgtggctccactcatgcactgcctcttccctggctt 141
|||| |||||| || ||||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggctt 98
>48428_cpt-miR408:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 4e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 102 ctgttgtggctccactcatgcactgcctcttccctggct 140
||||| ||||||| | |||||||||||||||||||||||
Sbjct: 53 ctgttttggctcctcccatgcactgcctcttccctggct 91
>51397_ppt-miR408b:pmrd
Length = 144
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 116 ctcatgcactgcctcttccctggctt 141
||||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggctt 115
>48584_gma-miR408a:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 102 ctgttgtggctccactcatgcactgcctcttccctggc 139
||||||||||| | |||||||||||||| |||||||||
Sbjct: 83 ctgttgtggctacgctcatgcactgcctgttccctggc 120
>54389_rco-miR408:pmrd
Length = 129
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 102 ctgttgtggctccactcatgcactgcctcttccctggctt 141
||||| |||||| || | ||||||||||||||||||||||
Sbjct: 73 ctgttttggctctacccctgcactgcctcttccctggctt 112
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 103 tgttgtggctccactcatgcactgcctcttccctg 137
|||| |||||| || ||||||||||||||||||||
Sbjct: 45 tgttttggctctacccatgcactgcctcttccctg 79
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 catgcactgcctcttccctggct 140
|||||||||||||||||||||||
Sbjct: 27 catgcactgcctcttccctggct 5
>47031_ath-miR408:pmrd
Length = 218
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 catgcactgcctcttccctggct 140
|||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggct 141
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 118 catgcactgcctcttccctggct 140
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 atgcactgcctcttccctggct 140
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>51566_pta-miR408:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 atgcactgcctcttccctggct 140
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>55104_zma-miR408:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>54690_tae-miR408:pmrd
Length = 187
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>54649_sof-miR408d:pmrd
Length = 215
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggct 197
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 52 agacagggacgaggtagagcatgg 75
|||||||||||||| |||||||||
Sbjct: 20 agacagggacgaggcagagcatgg 43
>54648_sof-miR408c:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54647_sof-miR408b:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54646_sof-miR408a:pmrd
Length = 283
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>48975_osa-miR408:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 120 tgcactgcctcttccctggct 140
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
>48317_bdi-miR408:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 118 catgcactgcctcttccctgg 138
|||||||||||||||||||||
Sbjct: 68 catgcactgcctcttccctgg 88
