miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>51593_ptc-miR156c:pmrd
          Length = 100

 Score = 69.9 bits (35), Expect = 3e-13
 Identities = 75/87 (86%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                      
Query: 6  agaaattgacagaagagagtgagcacaaagaggcaca-tgatataactctatatcactgc 64
          ||||| ||||||||||||||||||||| ||||||| | |  ||||| |||||| || |||
Sbjct: 5  agaaactgacagaagagagtgagcacacagaggcatatttgtataaatctataccattgc 64

                                     
Query: 65 ttttgtgtgctcactactctttctgtc 91
          ||||| ||||||||| ||| |||||||
Sbjct: 65 ttttgcgtgctcacttctcattctgtc 91




>51595_ptc-miR156e:pmrd
          Length = 100

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 6  agaaattgacagaagagagtgagcacaaagaggca 40
          ||||||||||||||||||||||||||| |||||||
Sbjct: 5  agaaattgacagaagagagtgagcacacagaggca 39




>54767_vvi-miR156b:pmrd
          Length = 102

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 12 tgacagaagagagtgagcacaaagaggca 40
          ||||||||||||||||||||| |||||||
Sbjct: 11 tgacagaagagagtgagcacacagaggca 39




>46912_ath-miR156c:pmrd
          Length = 104

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                              
Query: 6  agaaattgacagaagagagtgagcacaaagaggcac 41
          ||||| ||||||||||||||||||||| | ||||||
Sbjct: 6  agaaactgacagaagagagtgagcacacaaaggcac 41




>54914_zma-miR156d:pmrd
          Length = 119

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 attgacagaagagagtgagcaca 32
          |||||||||||||||||||||||
Sbjct: 14 attgacagaagagagtgagcaca 36




>48804_osa-miR156d:pmrd
          Length = 129

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 10 attgacagaagagagtgagcaca 32
          |||||||||||||||||||||||
Sbjct: 18 attgacagaagagagtgagcaca 40




>46913_ath-miR156d:pmrd
          Length = 118

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  agaaattgacagaagagagtgagcaca 32
          |||| ||||||||||||||||||||||
Sbjct: 12 agaagttgacagaagagagtgagcaca 38




>46910_ath-miR156a:pmrd
          Length = 123

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                     
Query: 6  agaaattgacagaagagagtgagcaca 32
          ||||| |||||||||||||||||||||
Sbjct: 15 agaaactgacagaagagagtgagcaca 41




>54912_zma-miR156b:pmrd
          Length = 124

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 20 ttgacagaagagagtgagcaca 41




>54758_tre-miR156:pmrd
          Length = 85

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagtgagcaca 22



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 68 tgtgtgctcactactctttctgtc 91
          |||||||||||| |||||||||||
Sbjct: 60 tgtgtgctcactcctctttctgtc 83




>54402_sbi-miR157:pmrd
          Length = 86

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 1  ttgacagaagagagtgagcaca 22




>52469_ptc-miRf10647-akr:pmrd
          Length = 104

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 94 ttgacagaagagagtgagcaca 73




>51594_ptc-miR156d:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 10 ttgacagaagagagtgagcaca 31




>48810_osa-miR156j:pmrd
          Length = 165

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 41 ttgacagaagagagtgagcaca 62




>48808_osa-miR156h:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 8  ttgacagaagagagtgagcaca 29




>48806_osa-miR156f:pmrd
          Length = 186

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 3  ttgacagaagagagtgagcaca 24




>48491_ghr-miR156d:pmrd
          Length = 96

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 8  ttgacagaagagagtgagcaca 29




>47667_ath-miRf10567-akr:pmrd
          Length = 98

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 11 ttgacagaagagagtgagcaca 32
          ||||||||||||||||||||||
Sbjct: 5  ttgacagaagagagtgagcaca 26




>54924_zma-miR156o:pmrd
          Length = 99

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>54923_zma-miR156n:pmrd
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>54922_zma-miR156m:pmrd
          Length = 83

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>54919_zma-miR156i:pmrd
          Length = 117

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcaca 33




>54918_zma-miR156h:pmrd
          Length = 115

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcaca 40




>54915_zma-miR156e:pmrd
          Length = 126

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcaca 40




>54913_zma-miR156c:pmrd
          Length = 139

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41




>54911_zma-miR156a:pmrd
          Length = 152

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcaca 38




>54769_vvi-miR156d:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31




>54768_vvi-miR156c:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31




>54656_stu-miR156a:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>54401_sbi-miR156i:pmrd
          Length = 121

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcaca 23




>54400_sbi-miR156h:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcaca 22




>54399_sbi-miR156g:pmrd
          Length = 89

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcaca 22




>54395_sbi-miR156c:pmrd
          Length = 95

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>54394_sbi-miR156b:pmrd
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>54393_sbi-miR156a:pmrd
          Length = 84

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>53789_ptc-miRf11967-akr:pmrd
          Length = 87

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcaca 23




>51926_ptc-miRf10104-akr:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 8  tgacagaagagagtgagcaca 28




>51596_ptc-miR156f:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31




>51592_ptc-miR156b:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31




>51591_ptc-miR156a:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31




>51357_ppt-miR156c:pmrd
          Length = 95

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcaca 30




>51355_ppt-miR156a:pmrd
          Length = 115

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41




>51354_ppr-miR156:pmrd
          Length = 103

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcaca 22




>49442_osa-miRf10227-akr:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 89 tgacagaagagagtgagcaca 69




>49326_osa-miRf10111-akr:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcaca 27




>48815_osa-miR156o:pmrd
          Length = 179

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 10  attgacagaagagagtgagca 30
           |||||||||||||||||||||
Sbjct: 158 attgacagaagagagtgagca 178




>48813_osa-miR156m:pmrd
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>48809_osa-miR156i:pmrd
          Length = 90

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcaca 23




>48807_osa-miR156g:pmrd
          Length = 116

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 4  tgacagaagagagtgagcaca 24




>48805_osa-miR156e:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcaca 30




>48803_osa-miR156c:pmrd
          Length = 149

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 29 tgacagaagagagtgagcaca 49




>48802_osa-miR156b:pmrd
          Length = 176

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 43 tgacagaagagagtgagcaca 63




>48801_osa-miR156a:pmrd
          Length = 100

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcaca 27




>48795_oru-miR156:pmrd
          Length = 93

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 2  tgacagaagagagtgagcaca 22




>48652_hvv-miR156a:pmrd
          Length = 394

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>48528_gma-miR156a:pmrd
          Length = 122

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41




>48489_ghr-miR156b:pmrd
          Length = 113

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcaca 23




>48488_ghr-miR156a:pmrd
          Length = 104

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 9  tgacagaagagagtgagcaca 29




>48425_cpt-miR156a:pmrd
          Length = 101

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcaca 31




>48336_bna-miR156a:pmrd
          Length = 82

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 1  tgacagaagagagtgagcaca 21




>48248_ath-miRf11148-akr:pmrd
          Length = 96

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 96 tgacagaagagagtgagcaca 76




>48243_ath-miRf11143-akr:pmrd
          Length = 102

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 90 tgacagaagagagtgagcaca 70




>47357_ath-miRf10257-akr:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcaca 23




>47356_ath-miRf10256-akr:pmrd
          Length = 94

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 3  tgacagaagagagtgagcaca 23




>46915_ath-miR156f:pmrd
          Length = 132

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcaca 41




>46914_ath-miR156e:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 7  tgacagaagagagtgagcaca 27




>46911_ath-miR156b:pmrd
          Length = 183

 Score = 42.1 bits (21), Expect = 8e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 12 tgacagaagagagtgagcaca 32
          |||||||||||||||||||||
Sbjct: 47 tgacagaagagagtgagcaca 67