miRNEST 2.0, an integrative microRNA resource :: BLAST
>51347_ppe-miR408:pmrd
Length = 105
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 86 ctgttgtgattctgctcatgcactgcctcttccctggct 124
|||||||| ||| |||||||||||||||||||||||||
Sbjct: 58 ctgttgtggctctactcatgcactgcctcttccctggct 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 gggaacaggcagagcatggatggagt 38
||||||||| ||||||||||||||||
Sbjct: 13 gggaacaggtagagcatggatggagt 38
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ggggaacaggcagagcatggatggag 37
||||||||||||||||||||||||||
Sbjct: 2 ggggaacaggcagagcatggatggag 27
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 102 catgcactgcctcttccctg 121
||||||||||||||||||||
Sbjct: 60 catgcactgcctcttccctg 79
>51762_ptc-miR408:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 12 ggggaacaggcagagcatggatggag 37
||||||||||||||||||||||||||
Sbjct: 17 ggggaacaggcagagcatggatggag 42
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 102 catgcactgcctcttccctggct 124
|||||||||||||||||||||||
Sbjct: 75 catgcactgcctcttccctggct 97
>54892_vvi-miR408:pmrd
Length = 107
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 102 catgcactgcctcttccctggctct 126
|||||||||||||||||||||||||
Sbjct: 76 catgcactgcctcttccctggctct 100
>51397_ppt-miR408b:pmrd
Length = 144
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 100 ctcatgcactgcctcttccctggct 124
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>48428_cpt-miR408:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 12 ggggaacaggcagagcatggatgga 36
|||||||||||||||||||||||||
Sbjct: 12 ggggaacaggcagagcatggatgga 36
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 102 catgcactgcctcttccctggctct 126
|||||||||||||||||||||||||
Sbjct: 69 catgcactgcctcttccctggctct 93
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 102 catgcactgcctcttccctggctc 125
||||||||||||||||||||||||
Sbjct: 27 catgcactgcctcttccctggctc 4
>47031_ath-miR408:pmrd
Length = 218
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 102 catgcactgcctcttccctggctc 125
||||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggctc 142
>51566_pta-miR408:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 103 atgcactgcctcttccctggctc 125
|||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggctc 86
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 102 catgcactgcctcttccctggct 124
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>55104_zma-miR408:pmrd
Length = 191
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggctc 174
>54690_tae-miR408:pmrd
Length = 187
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggctc 158
>54649_sof-miR408d:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggctc 198
>54648_sof-miR408c:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54647_sof-miR408b:pmrd
Length = 286
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggctc 269
>54646_sof-miR408a:pmrd
Length = 283
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggctc 266
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 103 atgcactgcctcttccctggct 124
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>48975_osa-miR408:pmrd
Length = 213
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggctc 125
||||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggctc 175
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggct 124
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>54389_rco-miR408:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 104 tgcactgcctcttccctggct 124
|||||||||||||||||||||
Sbjct: 91 tgcactgcctcttccctggct 111
>48584_gma-miR408a:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 99 gctcatgcactgcctcttccctggc 123
||||||||||||||| |||||||||
Sbjct: 96 gctcatgcactgcctgttccctggc 120
>48317_bdi-miR408:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 102 catgcactgcctcttccctgg 122
|||||||||||||||||||||
Sbjct: 68 catgcactgcctcttccctgg 88
