miRNEST 2.0, an integrative microRNA resource :: BLAST
>54821_vvi-miR169s:pmrd
Length = 99
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 99 ccggcaagttgttcttggctacattttgctctctt 133
|||||||||||||| |||||||||| |||||||||
Sbjct: 65 ccggcaagttgttcctggctacattctgctctctt 99
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 22 gaaagtagagtgcatccaaggatgacttgccggca 56
|||||| || |||| ||||||||||||||||||||
Sbjct: 1 gaaagtggattgcagccaaggatgacttgccggca 35
>46961_ath-miR169b:pmrd
Length = 181
Score = 54.0 bits (27), Expect = 3e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 101 ggcaagttgttctt-ggctacattttgctctcttcttct 138
|||||||||| ||| ||||||||||||||||||||||||
Sbjct: 124 ggcaagttgtccttcggctacattttgctctcttcttct 162
>52491_ptc-miRf10669-akr:pmrd
Length = 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 ccggcaagttgttcttggctacattt 124
||||||||||||||||||||||||||
Sbjct: 85 ccggcaagttgttcttggctacattt 110
>51683_ptc-miR169z:pmrd
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 99 ccggcaagttgttcttggctacattt 124
||||||||||||||||||||||||||
Sbjct: 90 ccggcaagttgttcttggctacattt 115
>48561_gma-miR169a:pmrd
Length = 121
Score = 50.1 bits (25), Expect = 5e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 98 gccggcaagttgttcttggctacattttgctctcttcttct 138
||||||||||||| ||||||| |||||||||||||||||
Sbjct: 81 gccggcaagttgtgtttggctatgttttgctctcttcttct 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 32 tgcatccaaggatgacttgccggc 55
|||| |||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccggc 42
>51664_ptc-miR169g:pmrd
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 25 agtagagtgcatccaaggatgacttgccggca 56
|||||| |||| ||||||||||||||||||||
Sbjct: 2 agtagaatgcagccaaggatgacttgccggca 33
>46960_ath-miR169a:pmrd
Length = 226
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 22 gaaagtagagtgcatccaaggatgacttgccg 53
|||||||| ||||| |||||||||||||||||
Sbjct: 6 gaaagtagtgtgcagccaaggatgacttgccg 37
>54805_vvi-miR169c:pmrd
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 99 ccggcaagttgttcttggctacattttgctctctt 133
|||||||||||| |||||||||||| ||||||||
Sbjct: 56 ccggcaagttgtccttggctacattgggctctctt 90
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 25 agtagagtgcatccaaggatgacttgccgg 54
|||||| |||| ||||||||||||||||||
Sbjct: 4 agtagaatgcagccaaggatgacttgccgg 33
>48351_bna-miR169b:pmrd
Length = 188
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 23 aaagtagagtgcatccaaggatgacttgccg 53
||||||| ||||| |||||||||||||||||
Sbjct: 7 aaagtagtgtgcagccaaggatgacttgccg 37
>48350_bna-miR169a:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 23 aaagtagagtgcatccaaggatgacttgccg 53
||||||| ||||| |||||||||||||||||
Sbjct: 8 aaagtagtgtgcagccaaggatgacttgccg 38
>55004_zma-miR169b:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 100 cggcaagttgttcttggctaca 121
||||||||||||||||||||||
Sbjct: 117 cggcaagttgttcttggctaca 138
>55003_zma-miR169a:pmrd
Length = 130
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 100 cggcaagttgttcttggctaca 121
||||||||||||||||||||||
Sbjct: 91 cggcaagttgttcttggctaca 112
>54825_vvi-miR169w:pmrd
Length = 143
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 31 gtgcatccaaggatgacttgccggca 56
||||| ||||||||||||||||||||
Sbjct: 10 gtgcagccaaggatgacttgccggca 35
>54813_vvi-miR169k:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 gagtgcatccaaggatgacttgccgg 54
||||||| ||||||||||||||||||
Sbjct: 8 gagtgcagccaaggatgacttgccgg 33
>54812_vvi-miR169j:pmrd
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 gagtgcatccaaggatgacttgccgg 54
||||||| ||||||||||||||||||
Sbjct: 8 gagtgcagccaaggatgacttgccgg 33
>50630_osa-miRf11415-akr:pmrd
Length = 147
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 14 aagaggcagaaagtagagtgcatccaaggatgacttgccggc 55
|||||||||| || || |||| |||||||||||||||||||
Sbjct: 2 aagaggcagagagcaggatgcagccaaggatgacttgccggc 43
>48876_osa-miR169a:pmrd
Length = 173
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 101 ggcaagttgttcttggctacat 122
||||||||||||||||||||||
Sbjct: 114 ggcaagttgttcttggctacat 135
>54818_vvi-miR169p:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggcag 57
|||||||||||||||||||||
Sbjct: 15 ccaaggatgacttgccggcag 35
>54815_vvi-miR169m:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggcag 57
|||||||||||||||||||||
Sbjct: 15 ccaaggatgacttgccggcag 35
>54549_sly-miR169c:pmrd
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 29 gagtgcatccaaggatgacttgccg 53
||||||| |||||||||||||||||
Sbjct: 36 gagtgcagccaaggatgacttgccg 60
>54547_sly-miR169a:pmrd
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 37/41 (90%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 99 ccggcaagttgttcttggcta-cattttgctctcttcttct 138
||||||||||||| ||||||| | ||||||||||||||||
Sbjct: 89 ccggcaagttgtttttggctataagtttgctctcttcttct 129
>54091_ptc-miRf12269-akr:pmrd
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 37 ccaaggatgacttgccggcag 57
|||||||||||||||||||||
Sbjct: 108 ccaaggatgacttgccggcag 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 96 cggccggcaagttgttcttggctacatt 123
|||||||||||||| ||||||||||||
Sbjct: 35 cggccggcaagttgcccttggctacatt 8
>52526_ptc-miRf10704-akr:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 37 ccaaggatgacttgccggcag 57
|||||||||||||||||||||
Sbjct: 107 ccaaggatgacttgccggcag 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 96 cggccggcaagttgttcttggctacatt 123
|||||||||||||| ||||||||||||
Sbjct: 34 cggccggcaagttgcccttggctacatt 7
>52003_ptc-miRf10181-akr:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 101 ggcaagttgttcttggctacatttt 125
|||| ||||||||||||||||||||
Sbjct: 86 ggcaggttgttcttggctacatttt 110
>51676_ptc-miR169s:pmrd
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggcag 57
|||||||||||||||||||||
Sbjct: 15 ccaaggatgacttgccggcag 35
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 96 cggccggcaagttgttcttggctacatt 123
||||||||||| ||| ||||||||||||
Sbjct: 88 cggccggcaagctgtccttggctacatt 115
>51665_ptc-miR169h:pmrd
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggcag 57
|||||||||||||||||||||
Sbjct: 14 ccaaggatgacttgccggcag 34
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 96 cggccggcaagttgttcttggctacatt 123
|||||||||||||| ||||||||||||
Sbjct: 87 cggccggcaagttgcccttggctacatt 114
>51661_ptc-miR169d:pmrd
Length = 111
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 tgcatccaaggatgacttgccggca 56
|||| ||||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccggca 33
>51659_ptc-miR169b:pmrd
Length = 113
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 101 ggcaagttgttcttggctacatttt 125
|||| ||||||||||||||||||||
Sbjct: 87 ggcaggttgttcttggctacatttt 111
>51339_phy-miR169:pmrd
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 32 tgcatccaaggatgacttgccggca 56
|||| ||||||||||||||||||||
Sbjct: 13 tgcagccaaggatgacttgccggca 37
>55023_zma-miR169u:pmrd
Length = 90
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 cggcaagttgttcttggcta 119
||||||||||||||||||||
Sbjct: 71 cggcaagttgttcttggcta 90
>55022_zma-miR169t:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 100 cggcaagttgttcttggcta 119
||||||||||||||||||||
Sbjct: 97 cggcaagttgttcttggcta 116
>55019_zma-miR169q:pmrd
Length = 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 8 ccaaggatgacttgccggca 27
>55005_zma-miR169c:pmrd
Length = 134
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 32 tgcatccaaggatgacttgccggc 55
|||| |||||||||||||||||||
Sbjct: 19 tgcagccaaggatgacttgccggc 42
>54819_vvi-miR169q:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 15 ccaaggatgacttgccggca 34
>54816_vvi-miR169n:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 15 ccaaggatgacttgccggca 34
>54809_vvi-miR169g:pmrd
Length = 121
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 22 gaaagtagagtgcatccaaggatgacttgccg 53
||||||| ||||| |||||||||||||||||
Sbjct: 1 gaaagtatggtgcagccaaggatgacttgccg 32
>54806_vvi-miR169d:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 101 ggcaagttgttcttggctacattt 124
|||||||||| |||||||||||||
Sbjct: 90 ggcaagttgtccttggctacattt 113
>54803_vvi-miR169a:pmrd
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 101 ggcaagttgttcttggctacattt 124
|||||||||| |||||||||||||
Sbjct: 92 ggcaagttgtccttggctacattt 115
>54638_sof-miR169:pmrd
Length = 143
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 4 ccaaggatgacttgccggca 23
>51663_ptc-miR169f:pmrd
Length = 239
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 31 gtgcatccaaggatgacttgccgg 54
||||| ||||||||||||||||||
Sbjct: 8 gtgcagccaaggatgacttgccgg 31
>51662_ptc-miR169e:pmrd
Length = 166
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 14 ccaaggatgacttgccggca 33
>50631_osa-miRf11416-akr:pmrd
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 tgcatccaaggatgacttgccggc 55
|||| |||||||||||||||||||
Sbjct: 125 tgcagccaaggatgacttgccggc 102
>49845_osa-miRf10630-akr:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 tgcatccaaggatgacttgccggc 55
|||| |||||||||||||||||||
Sbjct: 105 tgcagccaaggatgacttgccggc 82
>48891_osa-miR169p:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 32 tgcatccaaggatgacttgccggc 55
|||| |||||||||||||||||||
Sbjct: 118 tgcagccaaggatgacttgccggc 95
>48878_osa-miR169c:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 32 tgcatccaaggatgacttgccggc 55
|||| |||||||||||||||||||
Sbjct: 9 tgcagccaaggatgacttgccggc 32
>48640_gso-miR169g*:pmrd
Length = 101
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 3 ccaaggatgacttgccggca 22
>48639_gso-miR169a:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 4 ccaaggatgacttgccggca 23
>48564_gma-miR169p:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 37 ccaaggatgacttgccggca 56
||||||||||||||||||||
Sbjct: 4 ccaaggatgacttgccggca 23
