miRNEST 2.0, an integrative microRNA resource :: BLAST
>51695_ptc-miR171l:pmrd
Length = 112
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactcatgtatgctt 118
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Sbjct: 78 cgagccgaatcaatatcactcttgtatgctt 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 26 ggaggagtagacacgacgtgatattggttcggctcatctt 65
|||| |||||||||| ||||||||||| |||||||||||
Sbjct: 1 ggagaagtagacacggtgtgatattggtccggctcatctt 40
>48568_gma-miR171b:pmrd
Length = 92
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 33 tagacacgacgtgatattggttcggctcatctta 66
|||||||| |||||||||||| ||||||||||||
Sbjct: 1 tagacacggcgtgatattggtacggctcatctta 34
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactcatgtatgctt 118
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Sbjct: 62 cgagccgaatcaatatcactcttgtttgctt 92
>46854_ach-miR171:pmrd
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 85 aggcgagccgaatcaatatcactcatgtat 114
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Sbjct: 86 aggcgagccgaatcaatatcactcttgtat 115
>54894_vvi-miR479:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactcatgtatgctt 118
||||||||| ||||||||||| |||||||||
Sbjct: 63 cgagccgaaccaatatcactcttgtatgctt 93
>51697_ptc-miR171n:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactcatgtatgctt 118
||||||||||||||||||||| |||| ||||
Sbjct: 70 cgagccgaatcaatatcactcttgtacgctt 100
>51696_ptc-miR171m:pmrd
Length = 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactcatgtatgctt 118
||||||||||||||||||||| |||| ||||
Sbjct: 70 cgagccgaatcaatatcactcttgtacgctt 100
>48721_mtr-miR171b:pmrd
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactcatgtatgctt 118
||||||||||||||||||||| ||| |||||
Sbjct: 2 cgagccgaatcaatatcactcttgtttgctt 32
>55038_zma-miR171k:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 gagccgaatcaatatcactcatgtat 114
|||||||| |||||||||||||||||
Sbjct: 67 gagccgaaccaatatcactcatgtat 92
>54457_sbi-miR171f:pmrd
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 gagccgaatcaatatcactcatgtat 114
|||||||| |||||||||||||||||
Sbjct: 82 gagccgaaccaatatcactcatgtat 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 43 gtgatattggttcggctcatc 63
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Sbjct: 99 gtgatattggttcggctcatc 79
>54456_sbi-miR171e:pmrd
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 gagccgaatcaatatcactcatgtat 114
|||||||| |||||||||||||||||
Sbjct: 87 gagccgaaccaatatcactcatgtat 112
>48902_osa-miR171h:pmrd
Length = 101
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 gagccgaatcaatatcactcatgtat 114
|||||||| |||||||||||||||||
Sbjct: 56 gagccgaaccaatatcactcatgtat 81
>55035_zma-miR171h:pmrd
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 89 gagccgaatcaatatcactcatgta 113
|||||||| ||||||||||||||||
Sbjct: 87 gagccgaaccaatatcactcatgta 111
>51798_ptc-miR479:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 cgagccgaatcaatatcactc 108
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Sbjct: 64 cgagccgaatcaatatcactc 84
