miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54845_vvi-miR319e:pmrd
Length = 107
Score = 212 bits (107), Expect = 5e-56
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 13 tgcagaaatgggggttcctttgcagcccaaaacaactccatcgctgaagaagatgatgaa 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcagaaatgggggttcctttgcagcccaaaacaactccatcgctgaagaagatgatgaa 60
Query: 73 cttcatgctccttgttttggactgaagggagctcctagttcttctct 119
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttcatgctccttgttttggactgaagggagctcctagttcttctct 107
>46994_ath-miR319c:pmrd
Length = 199
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 88 tttggactgaagggagctcct 108
|||||||||||||||||||||
Sbjct: 169 tttggactgaagggagctcct 189
>54380_pvu-miR319c:pmrd
Length = 734
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 410 ttggactgaagggagctcct 429
>52398_ptc-miRf10576-akr:pmrd
Length = 192
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>51714_ptc-miR319h:pmrd
Length = 195
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184
>51713_ptc-miR319g:pmrd
Length = 204
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 176 ttggactgaagggagctcct 195
>51712_ptc-miR319f:pmrd
Length = 202
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 174 ttggactgaagggagctcct 193
>51711_ptc-miR319e:pmrd
Length = 192
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>51385_ppt-miR319b:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 141 ttggactgaagggagctcct 160
>51351_ppl-miR319:pmrd
Length = 204
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 ttggactgaagggagctcct 108
||||||||||||||||||||
Sbjct: 174 ttggactgaagggagctcct 193
