miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>51301_osa-miRf12086-akr:pmrd
          Length = 97

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 69 cgccgttagggttccgtccatt 90
          ||||||||||||||||||||||
Sbjct: 4  cgccgttagggttccgtccatt 25




>50994_osa-miRf11779-akr:pmrd
          Length = 107

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 69 cgccgttagggttccgtccatt 90
          ||||||||||||||||||||||
Sbjct: 99 cgccgttagggttccgtccatt 78



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 71 ccgttagggttccgtccatt 90
          ||||||||||||||||||||
Sbjct: 11 ccgttagggttccgtccatt 30




>50691_osa-miRf11476-akr:pmrd
          Length = 99

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 69 cgccgttagggttccgtccatt 90
          ||||||||||||||||||||||
Sbjct: 5  cgccgttagggttccgtccatt 26




>50001_osa-miRf10786-akr:pmrd
          Length = 88

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 69 cgccgttagggttccgtccatt 90
          ||||||||||||||||||||||
Sbjct: 63 cgccgttagggttccgtccatt 84




>49299_osa-miRf10084-akr:pmrd
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 69 cgccgttagggttccgtccatt 90
          ||||||||||||||||||||||
Sbjct: 6  cgccgttagggttccgtccatt 27




>50463_osa-miRf11248-akr:pmrd
          Length = 107

 Score = 42.1 bits (21), Expect = 9e-05
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 69 cgccgttagggttccgtccat 89
          |||||||||||||||||||||
Sbjct: 99 cgccgttagggttccgtccat 79