miRNEST 2.0, an integrative microRNA resource :: BLAST
>48699_mtr-miR159a:pmrd
Length = 168
Score = 333 bits (168), Expect = 3e-92
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 22 tggagcttcctttagtccaaatatggatcttgctatgttgatagagctgcttagctatgg 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagcttcctttagtccaaatatggatcttgctatgttgatagagctgcttagctatgg 60
Query: 82 gtccctcaactctacccatcttgttctttgtggtagttttgtggcttccatatctaggga 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtccctcaactctacccatcttgttctttgtggtagttttgtggcttccatatctaggga 120
Query: 142 gccttatcacctttagtttaatctttctttggattgaagggagctcta 189
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccttatcacctttagtttaatctttctttggattgaagggagctcta 168
>48701_mtr-miR159c:pmrd
Length = 44
Score = 69.9 bits (35), Expect = 7e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacatcttgctctctt 203
|||||||||||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatcttgctctctt 35
>48728_mtr-miR319b:pmrd
Length = 42
Score = 67.9 bits (34), Expect = 3e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctacatcttgctctctt 203
||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatcttgctctctt 34
>54378_pvu-miR159:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 1e-11
Identities = 109/132 (82%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 65 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 121
||||||||||||||||| |||| || |||||||||| |||| |||||||||| ||
Sbjct: 45 gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102
Query: 122 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 178
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
Query: 179 agggagctctac 190
||||||||||||
Sbjct: 163 agggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 65.9 bits (33), Expect = 1e-11
Identities = 109/132 (82%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 65 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 121
||||||||||||||||| |||| || |||||||||| |||| |||||||||| ||
Sbjct: 45 gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102
Query: 122 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 178
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
Query: 179 agggagctctac 190
||||||||||||
Sbjct: 163 agggagctctac 174
>48820_osa-miR159b:pmrd
Length = 188
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatcttg 196
|||||||||||||||||||||| |||||||
Sbjct: 156 tctttggattgaagggagctctgcatcttg 185
>48686_ltu-miR159:pmrd
Length = 345
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacatcttgctctcttact 206
||||||||||||||||||||||| | |||||| |||||
Sbjct: 1 tttggattgaagggagctctacaccatgctcttttact 38
>48656_hvv-miR159a:pmrd
Length = 303
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacatcttgctctcttact 206
|||||||||||||||||||| ||||||| ||| |||||
Sbjct: 1 tttggattgaagggagctctgcatcttgatctattact 38
>48539_gma-miR159a:pmrd
Length = 214
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 166 ttctttggattgaagggagctctaca 191
||||||||||||||||||||||||||
Sbjct: 172 ttctttggattgaagggagctctaca 197
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 108 tttgtggtagttttgtggcttccatatctagggagc 143
||||||||||| ||||||||||||||| | ||||||
Sbjct: 111 tttgtggtagtcttgtggcttccatatttggggagc 146
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 65 gagctgcttagctatgggtccctcaactctacccatc 101
||||||||||||||||| |||| || ||||||||||
Sbjct: 64 gagctgcttagctatggatcccacagttctacccatc 100
>48395_bra-miR159a:pmrd
Length = 185
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 166 ttctttggattgaagggagctctaca 191
||||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 166 ttctttggattgaagggagctctaca 191
||||||||||||||||||||||||||
Sbjct: 158 ttctttggattgaagggagctctaca 183
>48819_osa-miR159a:pmrd
Length = 272
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatctt 195
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatctt 195
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>46932_ath-miR159b:pmrd
Length = 196
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 166 ttctttggattgaagggagctctacatct 194
||||||||||||||||||||||| |||||
Sbjct: 165 ttctttggattgaagggagctcttcatct 193
>46931_ath-miR159a:pmrd
Length = 184
Score = 50.1 bits (25), Expect = 7e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 166 ttctttggattgaagggagctctac 190
|||||||||||||||||||||||||
Sbjct: 160 ttctttggattgaagggagctctac 184
>54931_zma-miR159b:pmrd
Length = 221
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacatcttg 196
|||||||||||||||||||| |||||||
Sbjct: 182 tttggattgaagggagctctgcatcttg 209
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatct 194
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 162 atctttctttggattgaagggagctcta 189
|||||| |||||||||||||||||||||
Sbjct: 151 atctttttttggattgaagggagctcta 178
>54930_zma-miR159a:pmrd
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatc 193
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>54777_vvi-miR159c:pmrd
Length = 190
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctaca 191
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>54631_sof-miR159d:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatc 193
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>54629_sof-miR159b:pmrd
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatc 193
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>54628_sof-miR159a:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctctacatc 193
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 167 tctttggattgaagggagctct 188
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctaca 191
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>54937_zma-miR159m:pmrd
Length = 457
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacatc 193
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54653_spr-miR159:pmrd
Length = 392
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctctacatc 193
|||||||||||||||||||| ||||
Sbjct: 1 tttggattgaagggagctctgcatc 25
>54540_sly-miR159:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctcta 189
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctcta 189
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctcta 189
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51602_ptc-miR159a:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 tttggattgaagggagctcta 189
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48821_osa-miR159c:pmrd
Length = 197
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 170 ttggattgaagggagctctacatct 194
|||||||||||||||||| ||||||
Sbjct: 168 ttggattgaagggagctccacatct 192
