miRNEST 2.0, an integrative microRNA resource :: BLAST
>54436_sbi-miR168:pmrd
Length = 106
Score = 109 bits (55), Expect = 3e-25
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
||||| |||||||||||| |||||||||||| ||| ||||||||| ||||||||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacctgccgccgtgctcggacgggacagatcccgcc 74
Query: 66 ttgcaccaagggaatccgagccg 88
|||||||||| ||||||||||||
Sbjct: 75 ttgcaccaagtgaatccgagccg 97
>54999_zma-miR168a:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 4e-09
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
||||| |||||||||||| ||||||||| || |||| || ||| |||| |||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacggatcccgcc 72
Query: 66 ttgcaccaagggaatccgagccg 88
|||||||||| ||||| ||||||
Sbjct: 73 ttgcaccaagtgaatcggagccg 95
>54636_sof-miR168a:pmrd
Length = 104
Score = 56.0 bits (28), Expect = 4e-09
Identities = 70/83 (84%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
||||| |||||||||||| ||||||||| || |||| || ||| |||| |||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacccgccgcccggcc--gacgggacggatcccgcc 72
Query: 66 ttgcaccaagggaatccgagccg 88
|||||||||| ||||| ||||||
Sbjct: 73 ttgcaccaagtgaatcggagccg 95
>55000_zma-miR168b:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 69/83 (83%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccacc 65
||||| |||||||||||| ||||||||| || |||| | | ||| |||| |||||| ||
Sbjct: 15 tcgggctcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatcccgcc 72
Query: 66 ttgcaccaagggaatccgagccg 88
||||| |||| ||||| ||||||
Sbjct: 73 ttgcatcaagtgaatcggagccg 95
>55002_zma-miR168m:pmrd
Length = 65
Score = 42.1 bits (21), Expect = 6e-05
Identities = 54/64 (84%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 12 tcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccaccttgcac 71
|||||||||||| ||||||||| || |||| | | ||| |||| |||||| ||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatcccgccttgcac 58
Query: 72 caag 75
||||
Sbjct: 59 caag 62
>54655_ssp-miR168:pmrd
Length = 65
Score = 42.1 bits (21), Expect = 6e-05
Identities = 54/64 (84%), Gaps = 2/64 (3%)
Strand = Plus / Plus
Query: 12 tcgcttggtgcaaatcgggacctgcggccctgctcggaccggacagatcccaccttgcac 71
|||||||||||| ||||||||| || |||| | | ||| |||| |||||| ||||||||
Sbjct: 1 tcgcttggtgcagatcgggacccgccgcccgg--ccgacgggacggatcccgccttgcac 58
Query: 72 caag 75
||||
Sbjct: 59 caag 62
>54637_sof-miR168b:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 52 ggacagatcccaccttgcaccaagggaatccgagccg 88
|||| |||||| |||||||||||| ||||| ||||||
Sbjct: 58 ggacggatcccgccttgcaccaagtgaatcggagccg 94
>48873_osa-miR168a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacc 33
||||| |||||||||||| |||||||||
Sbjct: 5 tcgggctcgcttggtgcagatcgggacc 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 57 gatcccaccttgcaccaagggaatccgagccg 88
|||||| |||||||||||| ||||| ||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggagccg 87
>48872_osa-miR168a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacc 33
||||| |||||||||||| |||||||||
Sbjct: 5 tcgggctcgcttggtgcagatcgggacc 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 57 gatcccaccttgcaccaagggaatccgagccg 88
|||||| |||||||||||| ||||| ||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggagccg 87
>48871_osa-miR168a:pmrd
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 tcgggttcgcttggtgcaaatcgggacc 33
||||| |||||||||||| |||||||||
Sbjct: 5 tcgggctcgcttggtgcagatcgggacc 32
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 57 gatcccaccttgcaccaagggaatccgagccg 88
|||||| |||||||||||| ||||| ||||||
Sbjct: 56 gatcccgccttgcaccaagtgaatcggagccg 87
