miRNEST 2.0, an integrative microRNA resource :: BLAST
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 88 ttattggtttgtgagcaggtattggctcccgccttgcatcaattgaatcggagcctc 144
||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 71 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcggatcctc 127
>46957_ath-miR168a:pmrd
Length = 138
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 88 ttattggtttgtgagcaggtattggctcccgccttgcatcaattgaatcggagcctc 144
||||||||||||||||||| ||||| |||||||||||||||| ||||||||| ||||
Sbjct: 76 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcggatcctc 132
>46959_ath-miR168m:pmrd
Length = 104
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 88 ttattggtttgtgagcaggtattggctcccgccttgcatcaa 129
||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 59 ttattggtttgtgagcagggattggatcccgccttgcatcaa 100
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcggga 53
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>46958_ath-miR168b:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 27 ctcggattcgcttggtgcaggtcggga 53
|||||||||||||||||||||||||||
Sbjct: 12 ctcggattcgcttggtgcaggtcggga 38
>55000_zma-miR168b:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>51651_ptc-miR168b:pmrd
Length = 136
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcggga 30
>51650_ptc-miR168a:pmrd
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 31 gattcgcttggtgcaggtcggga 53
|||||||||||||||||||||||
Sbjct: 8 gattcgcttggtgcaggtcggga 30
>48560_gma-miR168:pmrd
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcggag 140
||||| |||||||||||||||| ||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38
>54802_vvi-miR168:pmrd
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggag 140
|||||||||||||||| ||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 9 attcgcttggtgcaggtcggga 30
>54388_rco-miR168:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 32 attcgcttggtgcaggtcggga 53
||||||||||||||||||||||
Sbjct: 17 attcgcttggtgcaggtcggga 38
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 108 attggctcccgccttgcatcaattgaatcg 137
||||| |||||||||||||||| |||||||
Sbjct: 112 attggatcccgccttgcatcaactgaatcg 141
>48349_bna-miR168:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 91 ttggtttgtgagcaggtattggctcccgccttgcatcaattgaatc 136
|||| ||||||||||| || || |||||||||| ||||| ||||||
Sbjct: 74 ttggcttgtgagcagggatcggatcccgccttgtatcaagtgaatc 119
>54999_zma-miR168a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcgggac 54
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggac 21
>54637_sof-miR168b:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>54636_sof-miR168a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>54546_sly-miR168:pmrd
Length = 145
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcgggac 54
|||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcgggac 21
>48873_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>48872_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>48871_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 114 tcccgccttgcatcaattgaatcggagcc 142
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>54375_pts-miR168b:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcggga 53
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54374_pts-miR168a:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcggga 53
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>54366_ptr-miR168:pmrd
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcggga 53
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
>48649_hte-miR168:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 34 tcgcttggtgcaggtcggga 53
||||||||||||||||||||
Sbjct: 1 tcgcttggtgcaggtcggga 20
