miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>53060_ptc-miRf11238-akr:pmrd
          Length = 123

 Score =  163 bits (82), Expect = 4e-41
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                       
Query: 57  aaatgataagtaaatttcaaacgtctggcatcgccacttgccaacagacatttagaattg 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  aaatgataagtaaatttcaaacgtctggcatcgccacttgccaacagacatttagaattg 26

                                 
Query: 117 cagtgccctgattagggcctcc 138
           ||||||||||||||||||||||
Sbjct: 25  cagtgccctgattagggcctcc 4




>51818_ptc-miR1447:pmrd
          Length = 116

 Score =  161 bits (81), Expect = 2e-40
 Identities = 81/81 (100%)
 Strand = Plus / Minus

                                                                       
Query: 57  aaatgataagtaaatttcaaacgtctggcatcgccacttgccaacagacatttagaattg 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  aaatgataagtaaatttcaaacgtctggcatcgccacttgccaacagacatttagaattg 22

                                
Query: 117 cagtgccctgattagggcctc 137
           |||||||||||||||||||||
Sbjct: 21  cagtgccctgattagggcctc 1